| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is 113968808
Identifier: 113968808
GI number: 113968808
Start: 528088
End: 528321
Strand: Direct
Name: 113968808
Synonym: Shewmr4_0464
Alternate gene names: NA
Gene position: 528088-528321 (Clockwise)
Preceding gene: 113968802
Following gene: 113968809
Centisome position: 11.22
GC content: 50.85
Gene sequence:
>234_bases ATGAAAACCCCTTTGATTATGTTAGTCTTGTCCGCATCACTGTTAACCTCCGCCTGCGCCGAGTTAGCCTGTTCTGCTAG GACGGATGTCGACCCCTATGAGCCCATGCTAGATAAACAGCGCTGCGTGGCCGAGGCGGATAAACAGTTAGCAGCCCACG AGAAAGCCAAAAAGGCTGCAGAGGACCAACAGCTTAAAGAAGCTGTCGACAAAGCGATTCAACAACGTCAATAG
Upstream 100 bases:
>100_bases CGAAATTGCTGCAAAAATAACCCTGAAACGTCAACATGCCCTAGTAAAGCTTGCCAACGTTAGCTTGGTTAAGTGTAGCT ATTTTGTTGAGGAGCCGAAG
Downstream 100 bases:
>100_bases AAAGGATTGGTATGAAGGGAGCGGGAGGAACACAGGGCGGTATTGGCCAATTTTTTATTGGGCTTGCCATGATGTGTGCA GGATTTTATCTGTTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVAEADKQLAAHEKAKKAAEDQQLKEAVDKAIQQRQ
Sequences:
>Translated_77_residues MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVAEADKQLAAHEKAKKAAEDQQLKEAVDKAIQQRQ >Mature_77_residues MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVAEADKQLAAHEKAKKAAEDQQLKEAVDKAIQQRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8457; Mature: 8457
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVAEADKQLAAHEKAKKAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EDQQLKEAVDKAIQQRQ HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVAEADKQLAAHEKAKKAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EDQQLKEAVDKAIQQRQ HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA