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The map label for this gene is ypfJ [H]

Identifier: 113968810

GI number: 113968810

Start: 528806

End: 529687

Strand: Direct

Name: ypfJ [H]

Synonym: Shewmr4_0466

Alternate gene names: 113968810

Gene position: 528806-529687 (Clockwise)

Preceding gene: 113968809

Following gene: 113968811

Centisome position: 11.24

GC content: 54.99

Gene sequence:

>882_bases
ATGCGTTGGCGTGACAGTGACCGCAGCTCCAATATCGAAGACAGACGTGACCAGCAGATGGCGTCCGCGGGCGTGCCTAG
CGCGCTCCTGCTGCGCTTGCTGCCTTTTCTACTTCGCACCAAAATAGGCCGAGTGATACTGCTGTTGGGCGGGCTATATT
TTGCGTTTCAATATTTTACTGGCGGATTGTCCCTAGATCCGAGCCATCAAGCGGGGTTTAGTCAATCACAATCGGCCAGC
AATACAGCCGCTCAAGATGAGAATGCCCAGTTTGTGGCGGCGATCCTCGGCACCACCGAAACCGTCTGGAATCAATTGCT
GCAAGGGCGATATGTCGAGCCCAAACTGGTGCTCTATCGCAATATGACCTCAACGGGATGCGGTATGGGACAGGCGCAAT
CAGGGCCTTTCTATTGCCCCGCTGATAGCAAAGTTTATATCGACTTGAGTTTTCTCGAGGAGCTGAAAAAACTTGGGGCG
CCGGGGGATTTCGCCTTCGCCTATGTGATTGCCCACGAGGTGGGTCATCATGTGCAGAACCTACTCGGGACCAGCACTAA
AGTGCGTCAGGCGCAGCAAGCCGTCGGCAAGGCGCAGGCCAATCAACTGAGTGTTGCCCTCGAATTGCAAGCCGACTGTT
ATGCTGGCGTGTGGGGGCATTATGTCGACAGGCAGCTCAATCTGCTCGAAGCCGGAGATGTAGAAGAGGGCATCGCTGCC
GCGAGTGCCGTGGGGGATGACCGCCTGCAAAAAATGGCTGGCCGAGCCGTACAACCCGAAGCTTTTACCCATGGCAGTTC
GGCTGACAGGGTAAAATGGTTTAAGACGGGTTTTGCCTCAGGCAAGCTTGCCAGCTGCAATACCTTTAATCACAACTCGT
GA

Upstream 100 bases:

>100_bases
TGTTTTTGCGCTCGTTAAAAGCGGCGCCCACCGAGCAGAATGATCCCAAATAACGGCTACACTGAAATCTAGTTCCCATA
CCCATAGCCTAGGAAATCCA

Downstream 100 bases:

>100_bases
TAACACTGCCTTAGCGTGGGATTGAAACATGGCATTTGAAGATAGGTTTCGGCTCAGTAGCCATGGGGTGATCACTAACG
ATGCAGGCCAAGTGTTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRWRDSDRSSNIEDRRDQQMASAGVPSALLLRLLPFLLRTKIGRVILLLGGLYFAFQYFTGGLSLDPSHQAGFSQSQSAS
NTAAQDENAQFVAAILGTTETVWNQLLQGRYVEPKLVLYRNMTSTGCGMGQAQSGPFYCPADSKVYIDLSFLEELKKLGA
PGDFAFAYVIAHEVGHHVQNLLGTSTKVRQAQQAVGKAQANQLSVALELQADCYAGVWGHYVDRQLNLLEAGDVEEGIAA
ASAVGDDRLQKMAGRAVQPEAFTHGSSADRVKWFKTGFASGKLASCNTFNHNS

Sequences:

>Translated_293_residues
MRWRDSDRSSNIEDRRDQQMASAGVPSALLLRLLPFLLRTKIGRVILLLGGLYFAFQYFTGGLSLDPSHQAGFSQSQSAS
NTAAQDENAQFVAAILGTTETVWNQLLQGRYVEPKLVLYRNMTSTGCGMGQAQSGPFYCPADSKVYIDLSFLEELKKLGA
PGDFAFAYVIAHEVGHHVQNLLGTSTKVRQAQQAVGKAQANQLSVALELQADCYAGVWGHYVDRQLNLLEAGDVEEGIAA
ASAVGDDRLQKMAGRAVQPEAFTHGSSADRVKWFKTGFASGKLASCNTFNHNS
>Mature_293_residues
MRWRDSDRSSNIEDRRDQQMASAGVPSALLLRLLPFLLRTKIGRVILLLGGLYFAFQYFTGGLSLDPSHQAGFSQSQSAS
NTAAQDENAQFVAAILGTTETVWNQLLQGRYVEPKLVLYRNMTSTGCGMGQAQSGPFYCPADSKVYIDLSFLEELKKLGA
PGDFAFAYVIAHEVGHHVQNLLGTSTKVRQAQQAVGKAQANQLSVALELQADCYAGVWGHYVDRQLNLLEAGDVEEGIAA
ASAVGDDRLQKMAGRAVQPEAFTHGSSADRVKWFKTGFASGKLASCNTFNHNS

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=296, Percent_Identity=49.6621621621622, Blast_Score=268, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31842; Mature: 31842

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRDSDRSSNIEDRRDQQMASAGVPSALLLRLLPFLLRTKIGRVILLLGGLYFAFQYFT
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLSLDPSHQAGFSQSQSASNTAAQDENAQFVAAILGTTETVWNQLLQGRYVEPKLVLYR
CCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEE
NMTSTGCGMGQAQSGPFYCPADSKVYIDLSFLEELKKLGAPGDFAFAYVIAHEVGHHVQN
CCCCCCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLGTSTKVRQAQQAVGKAQANQLSVALELQADCYAGVWGHYVDRQLNLLEAGDVEEGIAA
HHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASAVGDDRLQKMAGRAVQPEAFTHGSSADRVKWFKTGFASGKLASCNTFNHNS
HHHCCHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWRDSDRSSNIEDRRDQQMASAGVPSALLLRLLPFLLRTKIGRVILLLGGLYFAFQYFT
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLSLDPSHQAGFSQSQSASNTAAQDENAQFVAAILGTTETVWNQLLQGRYVEPKLVLYR
CCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEE
NMTSTGCGMGQAQSGPFYCPADSKVYIDLSFLEELKKLGAPGDFAFAYVIAHEVGHHVQN
CCCCCCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLGTSTKVRQAQQAVGKAQANQLSVALELQADCYAGVWGHYVDRQLNLLEAGDVEEGIAA
HHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASAVGDDRLQKMAGRAVQPEAFTHGSSADRVKWFKTGFASGKLASCNTFNHNS
HHHCCHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]