| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968653
Identifier: 113968653
GI number: 113968653
Start: 334402
End: 334908
Strand: Direct
Name: 113968653
Synonym: Shewmr4_0309
Alternate gene names: NA
Gene position: 334402-334908 (Clockwise)
Preceding gene: 113968652
Following gene: 113968654
Centisome position: 7.11
GC content: 47.14
Gene sequence:
>507_bases ATGGCTCTACCAGAAGTGATTAATCATCAAGACCTTTTATTAACCCTCAATACCAACGAAGAACAGATCATCAAAGATGC CCTACCAGGCGTCGACGTGTACCCGTTATTTTTAGACCCTGAAAATGGAATTTGGGTGATCCGTGCCAAGTTTAAGCCGG GCATCACCTTGCCAAAGCATTTTCACACGGGTGTAGTGCATTTCTATACTCTAGCTGGGCGCTGGAACTATGTTGAATAC CCAGACCAACCGCAAACTGCGGGCAGCTATTTATACGAACCAGGCGGTTCAATCCACACTTTCCACTGCCCCGCCGATTC AGAGGGTGCCGATGGGGTGATGGTCATCTCTGGGGCGAATATTAACTTTGATGATGATGGTAACTTAATGTTTATTATGG ATTCAGGTTGGATTGAGCAGGCACTCTTAGCGGCTGCAAAAGCACAGGGGATTAAGCCTCGTTATATCAAGCCTGGTGCG TTAGCACGTATGAGTGATGCGGAATAG
Upstream 100 bases:
>100_bases CAGTGAACGCCTCCGACGGTTTTGAAAACTTTAAATATCCACTGCTGGGGTAGTGGTAGCTCGACCCATAAACACTATAA CAACAATGAGGAATGCAAAC
Downstream 100 bases:
>100_bases GAACCTTGCTATGAGCTTGATGACTATGCCAACGATGAATGCCATCGTTATGCAGGATGGTGAAGTCAGCCTGCAACAGG TCGATTTACCCAAGCCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MALPEVINHQDLLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKHFHTGVVHFYTLAGRWNYVEY PDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVISGANINFDDDGNLMFIMDSGWIEQALLAAAKAQGIKPRYIKPGA LARMSDAE
Sequences:
>Translated_168_residues MALPEVINHQDLLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKHFHTGVVHFYTLAGRWNYVEY PDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVISGANINFDDDGNLMFIMDSGWIEQALLAAAKAQGIKPRYIKPGA LARMSDAE >Mature_167_residues ALPEVINHQDLLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKHFHTGVVHFYTLAGRWNYVEYP DQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVISGANINFDDDGNLMFIMDSGWIEQALLAAAKAQGIKPRYIKPGAL ARMSDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18527; Mature: 18396
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPEVINHQDLLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKH CCCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC FHTGVVHFYTLAGRWNYVEYPDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVISGAN CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEECCC INFDDDGNLMFIMDSGWIEQALLAAAKAQGIKPRYIKPGALARMSDAE CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure ALPEVINHQDLLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKH CCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC FHTGVVHFYTLAGRWNYVEYPDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVISGAN CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEECCC INFDDDGNLMFIMDSGWIEQALLAAAKAQGIKPRYIKPGALARMSDAE CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA