Click here to switch to the map view.

The map label for this gene is 113968644

Identifier: 113968644

GI number: 113968644

Start: 321332

End: 321703

Strand: Direct

Name: 113968644

Synonym: Shewmr4_0300

Alternate gene names: NA

Gene position: 321332-321703 (Clockwise)

Preceding gene: 113968643

Following gene: 113968645

Centisome position: 6.83

GC content: 48.92

Gene sequence:

>372_bases
ATGATGAAAACATTACTACTCACACTGGTTGTTGCAACCCTGTTCACTGGCGCAGCCAATGCCGGAGACCTTGTCAAGAT
GAAAGGCAGTACCCAAGGTCGCAGCAATCATGAATTTATTTACCAAGATGGTTGTAAAGGATGCCACCAAGGCTCGGGTA
AACAAAATGCCACCGATGCGGCCTGCGTTGAATGTCATGGCGAAATCACCAGTATTCCAGTGGATGAGTCCAAACTTGCC
ATCCCTGAAGCCCATCCACACAAATCACTGCACTACAACCAAGGTGCCAGCTGCTTAGCCTGTCACAGCGAGCATGAGAA
AAAGGCTCCAGTGTGCGCTGAATGCCACCGCACTTGGTTCAAAGAAATGTAA

Upstream 100 bases:

>100_bases
TCACGGTGGAACCCGTTTAAGTTCAACAGCTTGTCTGGAGTGTTTAACGATGGGAATTATCGTTGCTGAAACCATCAAAT
CTGACATGCAGGCCTAAATC

Downstream 100 bases:

>100_bases
TTTAATTTTTATAATACAAAAACTTAAGAAAGGTAATGATGATGAAAAAATCCACCCGGTTTATGTTGTCCATGGTGGCA
ACCGCTATCGCACTATCTCA

Product: tetraheme cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MMKTLLLTLVVATLFTGAANAGDLVKMKGSTQGRSNHEFIYQDGCKGCHQGSGKQNATDAACVECHGEITSIPVDESKLA
IPEAHPHKSLHYNQGASCLACHSEHEKKAPVCAECHRTWFKEM

Sequences:

>Translated_123_residues
MMKTLLLTLVVATLFTGAANAGDLVKMKGSTQGRSNHEFIYQDGCKGCHQGSGKQNATDAACVECHGEITSIPVDESKLA
IPEAHPHKSLHYNQGASCLACHSEHEKKAPVCAECHRTWFKEM
>Mature_123_residues
MMKTLLLTLVVATLFTGAANAGDLVKMKGSTQGRSNHEFIYQDGCKGCHQGSGKQNATDAACVECHGEITSIPVDESKLA
IPEAHPHKSLHYNQGASCLACHSEHEKKAPVCAECHRTWFKEM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13324; Mature: 13324

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTLLLTLVVATLFTGAANAGDLVKMKGSTQGRSNHEFIYQDGCKGCHQGSGKQNATDA
CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCH
ACVECHGEITSIPVDESKLAIPEAHPHKSLHYNQGASCLACHSEHEKKAPVCAECHRTWF
HHHEECCCEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
KEM
HCC
>Mature Secondary Structure
MMKTLLLTLVVATLFTGAANAGDLVKMKGSTQGRSNHEFIYQDGCKGCHQGSGKQNATDA
CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCH
ACVECHGEITSIPVDESKLAIPEAHPHKSLHYNQGASCLACHSEHEKKAPVCAECHRTWF
HHHEECCCEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
KEM
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA