| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is ina [H]
Identifier: 113968470
GI number: 113968470
Start: 139356
End: 142166
Strand: Direct
Name: ina [H]
Synonym: Shewmr4_0125
Alternate gene names: 113968470
Gene position: 139356-142166 (Clockwise)
Preceding gene: 113968469
Following gene: 113968472
Centisome position: 2.96
GC content: 49.88
Gene sequence:
>2811_bases ATGCGAAGTTCAAAAAGTATCACAGCGTTAGGATTGATGTTGGCCTTGCTGAGTGGCGCAAGTATTGCGGCGCCCAATCA TACGCCAGCGGATGCGGGTGTCATTAATAAAGAAAGGATCCTTTATTGGTTGATCAAGCGGGGTGAAGTCTCCGCCGATG CTAGCGACAGCGTTAAGCAAGCGGCCGTTGAAGCCTATATTGCCCGTGCCAGTCTAGCTCAGCCCAAAGAGCCGAGAATG GTGATTGAGGCCGAACATGACAGACTGCAGAAAGTAAAATCGACAGCGATGATGCGCGCACCCGCACAGCGGGTGTTAGG GGATGCAGACGTGACCAAAACGGTGAAAGTATTAACCGTACTGATTGATTTTCCTGATTTAAAGTATAACAACAATGGTT TGACGGCGAGTGATACCGACATGTATTACTCAAGTTACCCCGCGTCTCACTACAAGAATTTACTCTTCTCCACCACTGGC TTTACGGGCCCGCAAGGTCAGACCTTAGACTCCGCCTATCAATATTACCAAGCCGTTTCAGGCAAGACTTTCTTCTTTAC TGGCGACGTGAAAGGTTGGTACACAGCAAGCCAAAATGCCGATTACTATGGCGCCAATAATGCTGGTAGGGGGAGTGATG CTAATGTGACTGAGCTGGTTAAAGAGGCCGTTAGCCAAGCGGTTGCCAATATGTCGGCGGCGGAACTCGCAACCTATGAT ATTGAAGATCCATACGATTTAAATAATAACGGCAATTTAGATGAACCCGATGGCATTATTGACCATGTGATGATTTTCCA CTCCAGTATTGGTGAAGAAACTGGCGGCGGTAAATTAGGGGACAACGCGATTTGGTCGCACCGTTATTATGTTGACCAGA GCACGCAAGGTTATAGCCTACCTGGGTCGACCAAAAAACTCTTCGGTTACACCATTCAACCAATCGATGCGGCGACAGGG GTCTGTACCCATGAGTTTGGCCACGATCTGGGCTTGCCCGATGAATATGACACGACGGAGAACACCAATAAAGATGGTTC TCCCGTGGGTGCTTGGTCTTTAATGTCTTCGGGTAGTTGGACTGGCGCCATCCCTGGTACTAAACCTAGCGGTTTTAGCC CCTACGCGCGCTCCTATTTACAGGAAAAATATAAAGGTAAATGGCTGAATGAGCGTGAAATCAGCTTAGACAGTATTCCT AAATCTGGTATGGAAGTGACACTGAATCAGGCGTCAAATCAAGAAGTAGTGAACCAGGTATCGATTCAGCTTCCTGCGAC ACAAATTGCCTTTAAAACACCTTATGAAGGGAGCTATCAGTATTACTCCGGCCAAGGAAACATGCTGAGCAATAGCATGA GCTTTACGGCAAACTTACCGGCGACGAGTGAAAAACTCACGCTTGCGATGCAGGCGAGTTGGGAGGTTGAAGCCGACTAC GACTATATGCAGGTCAAAGTGAACGGTGTGGCGATTGCGGGCAATTACACTAAGTCCGTCAACGCGATTAACAGCGCTCG ACATATTATTACGGGTAAATCATCGAGCATTTCGGCAGCGGTCGGCAGCGACGCTTGGGTGGGGTTGGAATATGATCTGT CAGCCTACGCTGGCAAAGCTGTGACGATTGAATTTACCTATGTGACCGATGAGGGGGTGAGCGAATCAGGTATCACTATC GACAATATCAGTATCAAACAAGGTGCAGCTGAGCTGTATGCCGATAATGCTGAGGTTGCGGGTCAAGCGACTCTGGCTGG TTACAGTCGGATCACCAATACGCGCCCAGGTGCAGCATCCCGCTACTTAATCCAATTACGTAGTCACAATGGTGTCGATG CCGGATTAAAGAATGAAGGTTTTGATCCCGGCGTACTCCTGTGGTTAGAGGATTTTAGTTATTACGATAACAATGTGTCT GATCATCCCGGCCGAAGCTTAATAGGCGTGATTGATGCGGATCAGAACATGATTGGCAACAACTCGACCGATGTACAAAT CCGCGATGCGGCCTTCAGCCTAGTCAGACAAACGGCTTATACTGGCGACACTAACCTCGAACCTACGAGTCTGTTTGACG ATAGTTTCGATTACAGTGCACCGCTCCAACCACAGTCGGGGATGGTGCTGCAAAAGCTGGGCTTGACGATGCAAGTGGTC TCTCAAGCCAGTGACAACAGCACCGCGGTGATCCGTTTAGCCAATGCGAATGCCGATCCCGCATTAACGCCCTTAACGGC AGCGATCAATCTAAGCCAAAATGGCTTAACAGCCTCTGTTACTGCAGTGGTTGATGGTGGCGAAGGCGCATACACTTATG CTTGGGATTTTGGTGTTGCGGGAGCGACCAGCACTTCAGCGTCGGCGACTTATACCTACGCGAACGCAGGAACCTATACG CTGACCTTAACGGTAACCGATGCCAAAGGCACAATTGCTACTGCCACTAAAACGCTTGTGATGAGCTTGCCCTTAACCGC TGGTTTTAGTGCCAGTGCCAACCAGCTTACGGTGAACTTTAGCAATACCTCGGCAGGTGGTGTTGGTAGCCGCAGCTATA CATGGAACTTTGGCGATGGCACCTCAAGCACCTCGGTATCGCCATCCCATACTTATACTCGCGCGGGCACTTACCTTGTC ACACTGACAGTGAAAGATACCCAAAACGCTACAGCAAGCAGCAGCTCAAGCGTTACCGTGTCTGAGCCAACGACACCGGG TGAAACCCCAAGTAGTGGCGGTGGTGGCAGTCTAAGCTGGCTGAGCCTGATGTTGCTCGGTGGTTTTGCGTGGCGCCGCC AGCGTCAATAA
Upstream 100 bases:
>100_bases ACACCGCGAGCCGCTAAAAACAAACTTGCCATAGAGCAAATTGGCACTAGCCTTTAAAAATAGCTTGGTTACAGCGCACA TTGTGACGGAAGGAAGAGTA
Downstream 100 bases:
>100_bases GCGGATGTGCTAACGAAAAATGCCTCTGATATAGAGGCATTTTTGTTTTTAGCACTTGAGTTAGTCTAGTTTTAACTTAG CCATCGCTTGTACTGCGGCC
Product: peptidase M6, immune inhibitor A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 936; Mature: 936
Protein sequence:
>936_residues MRSSKSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQAAVEAYIARASLAQPKEPRM VIEAEHDRLQKVKSTAMMRAPAQRVLGDADVTKTVKVLTVLIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTG FTGPQGQTLDSAYQYYQAVSGKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSAAELATYD IEDPYDLNNNGNLDEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSLPGSTKKLFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENTNKDGSPVGAWSLMSSGSWTGAIPGTKPSGFSPYARSYLQEKYKGKWLNEREISLDSIP KSGMEVTLNQASNQEVVNQVSIQLPATQIAFKTPYEGSYQYYSGQGNMLSNSMSFTANLPATSEKLTLAMQASWEVEADY DYMQVKVNGVAIAGNYTKSVNAINSARHIITGKSSSISAAVGSDAWVGLEYDLSAYAGKAVTIEFTYVTDEGVSESGITI DNISIKQGAAELYADNAEVAGQATLAGYSRITNTRPGAASRYLIQLRSHNGVDAGLKNEGFDPGVLLWLEDFSYYDNNVS DHPGRSLIGVIDADQNMIGNNSTDVQIRDAAFSLVRQTAYTGDTNLEPTSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV SQASDNSTAVIRLANANADPALTPLTAAINLSQNGLTASVTAVVDGGEGAYTYAWDFGVAGATSTSASATYTYANAGTYT LTLTVTDAKGTIATATKTLVMSLPLTAGFSASANQLTVNFSNTSAGGVGSRSYTWNFGDGTSSTSVSPSHTYTRAGTYLV TLTVKDTQNATASSSSSVTVSEPTTPGETPSSGGGGSLSWLSLMLLGGFAWRRQRQ
Sequences:
>Translated_936_residues MRSSKSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQAAVEAYIARASLAQPKEPRM VIEAEHDRLQKVKSTAMMRAPAQRVLGDADVTKTVKVLTVLIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTG FTGPQGQTLDSAYQYYQAVSGKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSAAELATYD IEDPYDLNNNGNLDEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSLPGSTKKLFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENTNKDGSPVGAWSLMSSGSWTGAIPGTKPSGFSPYARSYLQEKYKGKWLNEREISLDSIP KSGMEVTLNQASNQEVVNQVSIQLPATQIAFKTPYEGSYQYYSGQGNMLSNSMSFTANLPATSEKLTLAMQASWEVEADY DYMQVKVNGVAIAGNYTKSVNAINSARHIITGKSSSISAAVGSDAWVGLEYDLSAYAGKAVTIEFTYVTDEGVSESGITI DNISIKQGAAELYADNAEVAGQATLAGYSRITNTRPGAASRYLIQLRSHNGVDAGLKNEGFDPGVLLWLEDFSYYDNNVS DHPGRSLIGVIDADQNMIGNNSTDVQIRDAAFSLVRQTAYTGDTNLEPTSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV SQASDNSTAVIRLANANADPALTPLTAAINLSQNGLTASVTAVVDGGEGAYTYAWDFGVAGATSTSASATYTYANAGTYT LTLTVTDAKGTIATATKTLVMSLPLTAGFSASANQLTVNFSNTSAGGVGSRSYTWNFGDGTSSTSVSPSHTYTRAGTYLV TLTVKDTQNATASSSSSVTVSEPTTPGETPSSGGGGSLSWLSLMLLGGFAWRRQRQ >Mature_936_residues MRSSKSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQAAVEAYIARASLAQPKEPRM VIEAEHDRLQKVKSTAMMRAPAQRVLGDADVTKTVKVLTVLIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTG FTGPQGQTLDSAYQYYQAVSGKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSAAELATYD IEDPYDLNNNGNLDEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSLPGSTKKLFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENTNKDGSPVGAWSLMSSGSWTGAIPGTKPSGFSPYARSYLQEKYKGKWLNEREISLDSIP KSGMEVTLNQASNQEVVNQVSIQLPATQIAFKTPYEGSYQYYSGQGNMLSNSMSFTANLPATSEKLTLAMQASWEVEADY DYMQVKVNGVAIAGNYTKSVNAINSARHIITGKSSSISAAVGSDAWVGLEYDLSAYAGKAVTIEFTYVTDEGVSESGITI DNISIKQGAAELYADNAEVAGQATLAGYSRITNTRPGAASRYLIQLRSHNGVDAGLKNEGFDPGVLLWLEDFSYYDNNVS DHPGRSLIGVIDADQNMIGNNSTDVQIRDAAFSLVRQTAYTGDTNLEPTSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV SQASDNSTAVIRLANANADPALTPLTAAINLSQNGLTASVTAVVDGGEGAYTYAWDFGVAGATSTSASATYTYANAGTYT LTLTVTDAKGTIATATKTLVMSLPLTAGFSASANQLTVNFSNTSAGGVGSRSYTWNFGDGTSSTSVSPSHTYTRAGTYLV TLTVKDTQNATASSSSSVTVSEPTTPGETPSSGGGGSLSWLSLMLLGGFAWRRQRQ
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 99639; Mature: 99639
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSKSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQ CCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH AAVEAYIARASLAQPKEPRMVIEAEHDRLQKVKSTAMMRAPAQRVLGDADVTKTVKVLTV HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHEEEEEE LIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTGFTGPQGQTLDSAYQYYQAVS EEECCCCEECCCCCCCCCCCCEECCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHC GKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSAAELATYD CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEC IEDPYDLNNNGNLDEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC PGSTKKLFGYTIQPIDAATGVCTHEFGHDLGLPDEYDTTENTNKDGSPVGAWSLMSSGSW CCCCHHHCCEEECCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE TGAIPGTKPSGFSPYARSYLQEKYKGKWLNEREISLDSIPKSGMEVTLNQASNQEVVNQV EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHE SIQLPATQIAFKTPYEGSYQYYSGQGNMLSNSMSFTANLPATSEKLTLAMQASWEVEADY EEECCCEEEEEECCCCCCEEEECCCCCEEECCCEEEEECCCCCCEEEEEEEECEEEECCC DYMQVKVNGVAIAGNYTKSVNAINSARHIITGKSSSISAAVGSDAWVGLEYDLSAYAGKA CEEEEEEEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEECCCCEEEEEEECHHHHCCCE VTIEFTYVTDEGVSESGITIDNISIKQGAAELYADNAEVAGQATLAGYSRITNTRPGAAS EEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCC RYLIQLRSHNGVDAGLKNEGFDPGVLLWLEDFSYYDNNVSDHPGRSLIGVIDADQNMIGN EEEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCEEEEEEECCCCCCCC NSTDVQIRDAAFSLVRQTAYTGDTNLEPTSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV CCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHH SQASDNSTAVIRLANANADPALTPLTAAINLSQNGLTASVTAVVDGGEGAYTYAWDFGVA HCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCC GATSTSASATYTYANAGTYTLTLTVTDAKGTIATATKTLVMSLPLTAGFSASANQLTVNF CCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEHHHEEEEEECCCCCCCCCCCCEEEEEE SNTSAGGVGSRSYTWNFGDGTSSTSVSPSHTYTRAGTYLVTLTVKDTQNATASSSSSVTV CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCEEEE SEPTTPGETPSSGGGGSLSWLSLMLLGGFAWRRQRQ ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSSKSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQ CCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH AAVEAYIARASLAQPKEPRMVIEAEHDRLQKVKSTAMMRAPAQRVLGDADVTKTVKVLTV HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHEEEEEE LIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTGFTGPQGQTLDSAYQYYQAVS EEECCCCEECCCCCCCCCCCCEECCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHC GKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSAAELATYD CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEC IEDPYDLNNNGNLDEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC PGSTKKLFGYTIQPIDAATGVCTHEFGHDLGLPDEYDTTENTNKDGSPVGAWSLMSSGSW CCCCHHHCCEEECCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE TGAIPGTKPSGFSPYARSYLQEKYKGKWLNEREISLDSIPKSGMEVTLNQASNQEVVNQV EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHE SIQLPATQIAFKTPYEGSYQYYSGQGNMLSNSMSFTANLPATSEKLTLAMQASWEVEADY EEECCCEEEEEECCCCCCEEEECCCCCEEECCCEEEEECCCCCCEEEEEEEECEEEECCC DYMQVKVNGVAIAGNYTKSVNAINSARHIITGKSSSISAAVGSDAWVGLEYDLSAYAGKA CEEEEEEEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEECCCCEEEEEEECHHHHCCCE VTIEFTYVTDEGVSESGITIDNISIKQGAAELYADNAEVAGQATLAGYSRITNTRPGAAS EEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCC RYLIQLRSHNGVDAGLKNEGFDPGVLLWLEDFSYYDNNVSDHPGRSLIGVIDADQNMIGN EEEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCEEEEEEECCCCCCCC NSTDVQIRDAAFSLVRQTAYTGDTNLEPTSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV CCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHH SQASDNSTAVIRLANANADPALTPLTAAINLSQNGLTASVTAVVDGGEGAYTYAWDFGVA HCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCC GATSTSASATYTYANAGTYTLTLTVTDAKGTIATATKTLVMSLPLTAGFSASANQLTVNF CCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEHHHEEEEEECCCCCCCCCCCCEEEEEE SNTSAGGVGSRSYTWNFGDGTSSTSVSPSHTYTRAGTYLVTLTVKDTQNATASSSSSVTV CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCEEEE SEPTTPGETPSSGGGGSLSWLSLMLLGGFAWRRQRQ ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]