| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968472
Identifier: 113968472
GI number: 113968472
Start: 142901
End: 143311
Strand: Direct
Name: 113968472
Synonym: Shewmr4_0127
Alternate gene names: NA
Gene position: 142901-143311 (Clockwise)
Preceding gene: 113968470
Following gene: 113968473
Centisome position: 3.04
GC content: 47.93
Gene sequence:
>411_bases ATGAAAAAATTATTATCAGCCTGCCTGATCTTATTCAGTGTTGTATTGAGTGCATATGCGGCCGACGAGAAAGAAGCTGC TCCCGCTGGAGATTACGCTTACTACGGTTTTGAACCCGAAATCGTGACTAACTATATTTCAAACCGCAAGAAGCTGGGGT TTGTGAAGATCAGTGTCGAGCTGATGGTGAAAAATCCCGATGATCTCGTCATCCTCGAGCGCCATGACCCGCTGCTGCGC GCCGCGATTATCGAAGTGCTGGGTAATCAGGCCGAAGAAAAGATTAAGTCCCTCACTGGCCGCGAAGAAATCCGCCGTGA GTGTTTCGATATGGTGAATAATCTGCTGACCAAAGAAGCGGGCAAACCTCTCGTGGTCAACCTGCTGTTTACCTCCTATC TTTACGATTAA
Upstream 100 bases:
>100_bases AAATACTCGTTACAATATAAGCAAACGTCGGCAGTCTACCAGATAGATTGGGAAGTTTCTTCCATTGACCATTATTGTTT TTAGGGAGCTGTAAACCGCG
Downstream 100 bases:
>100_bases TCTCGCTACTATGCTAAGGGCTGAACTTTGGTTCAGCCCGCCCTTGCTGATAAGTCATTATGCCTAAACCCGCCATTAAA ACTGCCGCTAAACCCGCGAC
Product: flagellar basal body-associated protein FliL-like protein
Products: NA
Alternate protein names: Flagellar Basal Body-Associated Protein FliL; Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKKLLSACLILFSVVLSAYAADEKEAAPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKNPDDLVILERHDPLLR AAIIEVLGNQAEEKIKSLTGREEIRRECFDMVNNLLTKEAGKPLVVNLLFTSYLYD
Sequences:
>Translated_136_residues MKKLLSACLILFSVVLSAYAADEKEAAPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKNPDDLVILERHDPLLR AAIIEVLGNQAEEKIKSLTGREEIRRECFDMVNNLLTKEAGKPLVVNLLFTSYLYD >Mature_136_residues MKKLLSACLILFSVVLSAYAADEKEAAPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKNPDDLVILERHDPLLR AAIIEVLGNQAEEKIKSLTGREEIRRECFDMVNNLLTKEAGKPLVVNLLFTSYLYD
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15345; Mature: 15345
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSACLILFSVVLSAYAADEKEAAPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEEE LMVKNPDDLVILERHDPLLRAAIIEVLGNQAEEKIKSLTGREEIRRECFDMVNNLLTKEA EEEECCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GKPLVVNLLFTSYLYD CCCHHHHHHHHHHHCC >Mature Secondary Structure MKKLLSACLILFSVVLSAYAADEKEAAPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEEE LMVKNPDDLVILERHDPLLRAAIIEVLGNQAEEKIKSLTGREEIRRECFDMVNNLLTKEA EEEECCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GKPLVVNLLFTSYLYD CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA