| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968465
Identifier: 113968465
GI number: 113968465
Start: 131996
End: 132445
Strand: Direct
Name: 113968465
Synonym: Shewmr4_0120
Alternate gene names: NA
Gene position: 131996-132445 (Clockwise)
Preceding gene: 113968462
Following gene: 113968469
Centisome position: 2.8
GC content: 48.0
Gene sequence:
>450_bases ATGTTGCGACAGGGATTGATGAAAAAACACATTTTACAGTGCTTCGCGGTACTGATGTTGCTGTTTGCTGGCCAAGCGAG TGCGGTGCCGACGGATGACATTGCCCAAATGCTAAAAGGTCAGGAAGATGCGTGGAACCGCGGCGATCTTGACGCTTACA TGCAGGGTTATTGGAAGAACGAGCAACTCAGATTTGTCTCTAACGGTAAGTTTCGTTATGGCTGGGAGGAAACCCTTGCC GTCTATAAGAAAAATTATCCGAATAAAGAGGCGTTGGGTGAGCTGAAGTTCACTATCAAAGAAATCAAAATGCTCAGCAA CTATGCCGCTATGGTGGTTGGGCGCTGGGATTTAAAGCGGCAAAAGGATGCACCCTCGGGCGTTTTTACTCTGCTGGTGG AAAAAATTGATGACCGCTGGGTGATCACTATGGACCACAGTTCGGACTGA
Upstream 100 bases:
>100_bases AATATCATCAGCTTTTTTTAATTATAAATCGGCTTAGACAAGATAGTCTGTGCCAAATTCGTTATAGTACATTTTTACCT GATTGTTGGGGAGGGATACT
Downstream 100 bases:
>100_bases TAAATTGATCTCGGACTAGCAAGCTAAAAGTGAGCTAGGCAGTCCGGTTCTTTAGGTAATTGTGGCGGCAGGGTGAAGTG GAAGTCCTGCTGTCCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MLRQGLMKKHILQCFAVLMLLFAGQASAVPTDDIAQMLKGQEDAWNRGDLDAYMQGYWKNEQLRFVSNGKFRYGWEETLA VYKKNYPNKEALGELKFTIKEIKMLSNYAAMVVGRWDLKRQKDAPSGVFTLLVEKIDDRWVITMDHSSD
Sequences:
>Translated_149_residues MLRQGLMKKHILQCFAVLMLLFAGQASAVPTDDIAQMLKGQEDAWNRGDLDAYMQGYWKNEQLRFVSNGKFRYGWEETLA VYKKNYPNKEALGELKFTIKEIKMLSNYAAMVVGRWDLKRQKDAPSGVFTLLVEKIDDRWVITMDHSSD >Mature_149_residues MLRQGLMKKHILQCFAVLMLLFAGQASAVPTDDIAQMLKGQEDAWNRGDLDAYMQGYWKNEQLRFVSNGKFRYGWEETLA VYKKNYPNKEALGELKFTIKEIKMLSNYAAMVVGRWDLKRQKDAPSGVFTLLVEKIDDRWVITMDHSSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17259; Mature: 17259
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQGLMKKHILQCFAVLMLLFAGQASAVPTDDIAQMLKGQEDAWNRGDLDAYMQGYWKN CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC EQLRFVSNGKFRYGWEETLAVYKKNYPNKEALGELKFTIKEIKMLSNYAAMVVGRWDLKR CEEEEEECCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QKDAPSGVFTLLVEKIDDRWVITMDHSSD CCCCCHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure MLRQGLMKKHILQCFAVLMLLFAGQASAVPTDDIAQMLKGQEDAWNRGDLDAYMQGYWKN CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC EQLRFVSNGKFRYGWEETLAVYKKNYPNKEALGELKFTIKEIKMLSNYAAMVVGRWDLKR CEEEEEECCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QKDAPSGVFTLLVEKIDDRWVITMDHSSD CCCCCHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA