Definition Ralstonia eutropha H16 chromosome 2, complete sequence.
Accession NC_008314
Length 2,912,490

Click here to switch to the map view.

The map label for this gene is 116696244

Identifier: 116696244

GI number: 116696244

Start: 2610401

End: 2611390

Strand: Direct

Name: 116696244

Synonym: H16_B2308

Alternate gene names: NA

Gene position: 2610401-2611390 (Clockwise)

Preceding gene: 116696243

Following gene: 116696252

Centisome position: 89.63

GC content: 70.4

Gene sequence:

>990_bases
ATGACCGCAATGCCCCCGAAGCCGTTTCTCGCCTGCGCCGCCGCCCTGACCGCGGTGCTGTCCGCAACGCCCGCCGCCGC
GCAGGCCCAATCCTGGCCGGACCGACCGATCCGGCTGGTGGTGCCCTTCGCCGCGGGCGGCGCCACTGACGTGCTGGGCC
GCCTGCTGGCAGTCGGCCTCGGCGAAAAGCTCGGCCAGTCGGTAGTGGTCGAGAACAAGCCCGGCGCCAGCACCGTGATC
GGCGCCACCCAGGTATCCAAGGCCGCGCCCGACGGCTACACGCTGCTGCTGGCGGCCAGCACCACGCTGACGCTGAACCC
GGCCATCCGCCAACACCTGGGCTACGACCCCATCAAGAGCTTCACCCCGCTGGGCCTGGTCGCCGACATGAGCCTGGTGC
TGGTAGCCAACCCGGACACGCAGATCACCACGCTCAAGGATCTGGTGACGCAGGCCAAGGCGCACCCCGACAAGTTCTCC
TACGGCTCGTTCGGCGCCGGCTCCTCGGTGCATTTCGGCGCGGAGATGCTCAAGTCCGCCACCGGCATCCGCATGGTCCA
CGTGCCCTTCAACGGCAGCGCCCCCAGCCTGACCGCGCTGGCCGGCGGCCAGGTGCCGATCGCGGTCGATACCGTGGTGG
CCACCCTGCCGCTGATCAAGGGTGGCAAGATCCGGCCAGTGGCAGTGCTGTCGCCGCAGCGACTGCCAGCGCTGCCGCAA
GTACCGACCGTCGCGGAGAGCGGCTATCCCGGCTTCCAGATGGGCACGTGGTTCGCGCTGCTGGCACCCGCGGGCCTGCC
CGCGCCGGTGCAGCAGAAGCTGGAGAAGGCGCTGGCCGAGGTCGCCAATGCACCCGCCACCAAGGCACGCATGGTCGAGC
TGGCGCTGACGCCGGCCTACGGCAATGGCGCGGCGGTGAAGGCGCGGGTGGAGAAGGAATTGCCTGAGATGCGGGCGGTG
GCGGCGCGGGCGGATATTCGGGCGGAGTAA

Upstream 100 bases:

>100_bases
GCAGCCCCTGGCTCGATTGAGCCTTCGGCTGGTCCCGGCCCCGCTTCATATTGCTTCCGATTGCCTTCTATTCCTACAAC
TGCCGGCAGGAGTGCCAACG

Downstream 100 bases:

>100_bases
CGAGATGGCGGGCCGGCCCCGGCCCGCTGTGGCTTACTCCAGCACGCGCATCGTCCGCTCGCCGTCCGGTGCCAACTGAT
GCAGCACTTTGCCCTTGAAA

Product: extra-cytoplasmic solute receptor

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTAMPPKPFLACAAALTAVLSATPAAAQAQSWPDRPIRLVVPFAAGGATDVLGRLLAVGLGEKLGQSVVVENKPGASTVI
GATQVSKAAPDGYTLLLAASTTLTLNPAIRQHLGYDPIKSFTPLGLVADMSLVLVANPDTQITTLKDLVTQAKAHPDKFS
YGSFGAGSSVHFGAEMLKSATGIRMVHVPFNGSAPSLTALAGGQVPIAVDTVVATLPLIKGGKIRPVAVLSPQRLPALPQ
VPTVAESGYPGFQMGTWFALLAPAGLPAPVQQKLEKALAEVANAPATKARMVELALTPAYGNGAAVKARVEKELPEMRAV
AARADIRAE

Sequences:

>Translated_329_residues
MTAMPPKPFLACAAALTAVLSATPAAAQAQSWPDRPIRLVVPFAAGGATDVLGRLLAVGLGEKLGQSVVVENKPGASTVI
GATQVSKAAPDGYTLLLAASTTLTLNPAIRQHLGYDPIKSFTPLGLVADMSLVLVANPDTQITTLKDLVTQAKAHPDKFS
YGSFGAGSSVHFGAEMLKSATGIRMVHVPFNGSAPSLTALAGGQVPIAVDTVVATLPLIKGGKIRPVAVLSPQRLPALPQ
VPTVAESGYPGFQMGTWFALLAPAGLPAPVQQKLEKALAEVANAPATKARMVELALTPAYGNGAAVKARVEKELPEMRAV
AARADIRAE
>Mature_328_residues
TAMPPKPFLACAAALTAVLSATPAAAQAQSWPDRPIRLVVPFAAGGATDVLGRLLAVGLGEKLGQSVVVENKPGASTVIG
ATQVSKAAPDGYTLLLAASTTLTLNPAIRQHLGYDPIKSFTPLGLVADMSLVLVANPDTQITTLKDLVTQAKAHPDKFSY
GSFGAGSSVHFGAEMLKSATGIRMVHVPFNGSAPSLTALAGGQVPIAVDTVVATLPLIKGGKIRPVAVLSPQRLPALPQV
PTVAESGYPGFQMGTWFALLAPAGLPAPVQQKLEKALAEVANAPATKARMVELALTPAYGNGAAVKARVEKELPEMRAVA
ARADIRAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33782; Mature: 33651

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMPPKPFLACAAALTAVLSATPAAAQAQSWPDRPIRLVVPFAAGGATDVLGRLLAVGL
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
GEKLGQSVVVENKPGASTVIGATQVSKAAPDGYTLLLAASTTLTLNPAIRQHLGYDPIKS
HHHHCCEEEEECCCCCCEEEEHHHHHHCCCCCEEEEEEECCEEEECHHHHHHCCCCCHHH
FTPLGLVADMSLVLVANPDTQITTLKDLVTQAKAHPDKFSYGSFGAGSSVHFGAEMLKSA
CCCCHHEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC
TGIRMVHVPFNGSAPSLTALAGGQVPIAVDTVVATLPLIKGGKIRPVAVLSPQRLPALPQ
CCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
VPTVAESGYPGFQMGTWFALLAPAGLPAPVQQKLEKALAEVANAPATKARMVELALTPAY
CCCHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCC
GNGAAVKARVEKELPEMRAVAARADIRAE
CCCCEEEHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAMPPKPFLACAAALTAVLSATPAAAQAQSWPDRPIRLVVPFAAGGATDVLGRLLAVGL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
GEKLGQSVVVENKPGASTVIGATQVSKAAPDGYTLLLAASTTLTLNPAIRQHLGYDPIKS
HHHHCCEEEEECCCCCCEEEEHHHHHHCCCCCEEEEEEECCEEEECHHHHHHCCCCCHHH
FTPLGLVADMSLVLVANPDTQITTLKDLVTQAKAHPDKFSYGSFGAGSSVHFGAEMLKSA
CCCCHHEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC
TGIRMVHVPFNGSAPSLTALAGGQVPIAVDTVVATLPLIKGGKIRPVAVLSPQRLPALPQ
CCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
VPTVAESGYPGFQMGTWFALLAPAGLPAPVQQKLEKALAEVANAPATKARMVELALTPAY
CCCHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCC
GNGAAVKARVEKELPEMRAVAARADIRAE
CCCCEEEHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]