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The map label for this gene is nirC [H]

Identifier: 116696214

GI number: 116696214

Start: 2578463

End: 2578825

Strand: Direct

Name: nirC [H]

Synonym: H16_B2278

Alternate gene names: 116696214

Gene position: 2578463-2578825 (Clockwise)

Preceding gene: 116696213

Following gene: 116696215

Centisome position: 88.53

GC content: 74.38

Gene sequence:

>363_bases
ATGCGTAATCACATCGCCTGGCGGCGCGCTGCGCTGGCGGGGCTGGCAGCGGCCTTGCTGGGCGCAGCGCCCGGCGCGGC
GGCCCAGCCCACCGCTGCCCGGCAGGCGCAGCTTGCGCACTGGCTGCGCGATGACTGCGGCGCCTGCCACGGCATGACGC
TTGGCGGCGGGCTGGGCCCGCCGCTGACGCGCGAGGCACTGTCCGGCAAGCCGCCCGAGGGCCTGGTCGCCACCGTGCTG
TACGGCCGCCCCGGCACCGCGATGCCGCCCTGGCAACCCTTCATGACGCAGGATGAAGCCCAATGGCTGATCGATCGACT
GCAGGCCGGCAAGCCACCGGCCGCCTCGCCGCAAGGCAACTGA

Upstream 100 bases:

>100_bases
CACGCTCAAGACCGTGATCAAGGACAAGCGCCTGATCACCCCGACCGGCAAGTTCAACGCCTATAACACGCAGCACGACG
TGTACTGAGCCGGCGCCACC

Downstream 100 bases:

>100_bases
TCCGCGGCCTGGCCGCGGCCTTGTGCGCCACCGTTGCCGCCGCGCTGGTGGCCGGTTGTGCCAGCGCCGCGCGCGGCACC
GGCGACCTGGGCGTGGTGGT

Product: cytochrome c, nitrite reductase associated (NirC)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRNHIAWRRAALAGLAAALLGAAPGAAAQPTAARQAQLAHWLRDDCGACHGMTLGGGLGPPLTREALSGKPPEGLVATVL
YGRPGTAMPPWQPFMTQDEAQWLIDRLQAGKPPAASPQGN

Sequences:

>Translated_120_residues
MRNHIAWRRAALAGLAAALLGAAPGAAAQPTAARQAQLAHWLRDDCGACHGMTLGGGLGPPLTREALSGKPPEGLVATVL
YGRPGTAMPPWQPFMTQDEAQWLIDRLQAGKPPAASPQGN
>Mature_120_residues
MRNHIAWRRAALAGLAAALLGAAPGAAAQPTAARQAQLAHWLRDDCGACHGMTLGGGLGPPLTREALSGKPPEGLVATVL
YGRPGTAMPPWQPFMTQDEAQWLIDRLQAGKPPAASPQGN

Specific function: Monoheme c-type cytochrome [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12436; Mature: 12436

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNHIAWRRAALAGLAAALLGAAPGAAAQPTAARQAQLAHWLRDDCGACHGMTLGGGLGP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLTREALSGKPPEGLVATVLYGRPGTAMPPWQPFMTQDEAQWLIDRLQAGKPPAASPQGN
CCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRNHIAWRRAALAGLAAALLGAAPGAAAQPTAARQAQLAHWLRDDCGACHGMTLGGGLGP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLTREALSGKPPEGLVATVLYGRPGTAMPPWQPFMTQDEAQWLIDRLQAGKPPAASPQGN
CCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566817; 10984043 [H]