| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is folE [H]
Identifier: 113478001
GI number: 113478001
Start: 7095389
End: 7096027
Strand: Reverse
Name: folE [H]
Synonym: Tery_4616
Alternate gene names: 113478001
Gene position: 7096027-7095389 (Counterclockwise)
Preceding gene: 113478002
Following gene: 113477999
Centisome position: 91.56
GC content: 38.03
Gene sequence:
>639_bases ATGAATTTACCAACAGTTCCAGATTTTGTTTCTCCCAATGACTTGAAAACGAAATATCAGACTTCGGTTACAGAAGCTGA AATGGTGCAAGCGGTAAGAACTTTATTAATAGGACTAGGAGAAAACCCAGATCGAGAAGGGTTATTAGATACTCCTAAAC GAGTGGTAAAAGCACTAAAATTTCTCACTTCAGGTTATAATCAATCTCTAGATGAACTGCTCAATGGAGCTGTTTTTAGT GAAGATACCTCAGAGATGGTTTTAGTTCGAGATATCGATCTTTTTAGCTCTTGCGAGCATCATATTCTCCCTATTATTGG TCGCGCTCATGTAGCATATATTCCCAATGGAAAAGTTATTGGGCTATCAAAAATTGCTCGAATTTGTGAAATGTATGCCC GACGTTTACAAGTTCAAGAGCGTCTAACAGCACAAATAGCTGATGCACTTCAAGGGTTACTTAGACCTTTAGGTGTTGCT GTAGTTGTTGAAGCAACTCATATGTGTATGGTCATGCGTGGAGTACAAAAAACTGGTTCTTGGACAACTACTAGCGCTAT GCGTGGTGTTTTTGCTGATGACGTGAAAACTCGTCAAGAATTTATGAGTTTAATTAAACATAGTCATAATTTCCATTAG
Upstream 100 bases:
>100_bases CATAAACACAGATAATAGTCCTTATAGTTCATCTAAACTTTATGAGGGAAAATATCTGTCAAACCGTTCAACAAAACATT AAGCTTAAAGCCTTTCAACT
Downstream 100 bases:
>100_bases TTTTTTTAAGTTAAGTGATGAACCCAAGTTAAGCGACAATAAGTAAAAGTTGCTTATTCAGGACTTATACAGAAATACTA TATCTAGGGGGGTTAAAGGT
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I 2; GTP-CH-I 2 [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNLPTVPDFVSPNDLKTKYQTSVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALKFLTSGYNQSLDELLNGAVFS EDTSEMVLVRDIDLFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARICEMYARRLQVQERLTAQIADALQGLLRPLGVA VVVEATHMCMVMRGVQKTGSWTTTSAMRGVFADDVKTRQEFMSLIKHSHNFH
Sequences:
>Translated_212_residues MNLPTVPDFVSPNDLKTKYQTSVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALKFLTSGYNQSLDELLNGAVFS EDTSEMVLVRDIDLFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARICEMYARRLQVQERLTAQIADALQGLLRPLGVA VVVEATHMCMVMRGVQKTGSWTTTSAMRGVFADDVKTRQEFMSLIKHSHNFH >Mature_212_residues MNLPTVPDFVSPNDLKTKYQTSVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALKFLTSGYNQSLDELLNGAVFS EDTSEMVLVRDIDLFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARICEMYARRLQVQERLTAQIADALQGLLRPLGVA VVVEATHMCMVMRGVQKTGSWTTTSAMRGVFADDVKTRQEFMSLIKHSHNFH
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=179, Percent_Identity=59.2178770949721, Blast_Score=234, Evalue=4e-62, Organism=Homo sapiens, GI4503949, Length=179, Percent_Identity=59.2178770949721, Blast_Score=234, Evalue=4e-62, Organism=Homo sapiens, GI66932970, Length=148, Percent_Identity=54.0540540540541, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI66932972, Length=139, Percent_Identity=56.8345323741007, Blast_Score=178, Evalue=4e-45, Organism=Escherichia coli, GI1788476, Length=209, Percent_Identity=37.799043062201, Blast_Score=125, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=60.1123595505618, Blast_Score=233, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6321706, Length=176, Percent_Identity=60.7954545454545, Blast_Score=224, Evalue=5e-60, Organism=Drosophila melanogaster, GI24656791, Length=196, Percent_Identity=56.6326530612245, Blast_Score=223, Evalue=9e-59, Organism=Drosophila melanogaster, GI24656796, Length=196, Percent_Identity=56.6326530612245, Blast_Score=222, Evalue=1e-58, Organism=Drosophila melanogaster, GI24656782, Length=196, Percent_Identity=56.6326530612245, Blast_Score=222, Evalue=1e-58,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23580; Mature: 23580
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPTVPDFVSPNDLKTKYQTSVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH FLTSGYNQSLDELLNGAVFSEDTSEMVLVRDIDLFSSCEHHILPIIGRAHVAYIPNGKVI HHHCCCCHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHHCCCEEEECCCCCEE GLSKIARICEMYARRLQVQERLTAQIADALQGLLRPLGVAVVVEATHMCMVMRGVQKTGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WTTTSAMRGVFADDVKTRQEFMSLIKHSHNFH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLPTVPDFVSPNDLKTKYQTSVTEAEMVQAVRTLLIGLGENPDREGLLDTPKRVVKALK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH FLTSGYNQSLDELLNGAVFSEDTSEMVLVRDIDLFSSCEHHILPIIGRAHVAYIPNGKVI HHHCCCCHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHHCCCEEEECCCCCEE GLSKIARICEMYARRLQVQERLTAQIADALQGLLRPLGVAVVVEATHMCMVMRGVQKTGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WTTTSAMRGVFADDVKTRQEFMSLIKHSHNFH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]