Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477999

Identifier: 113477999

GI number: 113477999

Start: 7089972

End: 7091165

Strand: Reverse

Name: 113477999

Synonym: Tery_4613

Alternate gene names: NA

Gene position: 7091165-7089972 (Counterclockwise)

Preceding gene: 113478001

Following gene: 113477998

Centisome position: 91.5

GC content: 44.3

Gene sequence:

>1194_bases
ATGTCCTTACCAATACAAACCAAGATGGCCATTGTAGGTGCGGGACCCCATGCCCTAACTTTGGTAACTCATCTGTTGCA
AAAACGGAAAAAGTATCACCATAAAATAATAGTATTTGACCCCAGTGCCACTTGGATGAGTCAGTGGCGACAGCAGTTTG
CAGCCCAAGAAATACCCCACTTGCGATCCCCCGCCGTTCACCATCCAGACCCAGATCCCTATTCCCTGCGTCGGTTTGCA
GAAAATCGCCCAAACGAACTATTCCCCCCCTACGACTTACCTGGAACAAAACTATTTCAAGAATTTTCCCAAGATGTAGT
TAGTCGCTGGCAGTTAGAAGACAAAGTATACAAAGCATCAGTGACAAACATTGTTCCCATAACCTACCGAGGGAACCCTC
AGTTTCGAGTTGAATTAGATGATGGCAACTCAACCATAGCTGGTCAAGTAATTATGGCCAATGGTGGGGGAAAACCTCAA
CTTCCAGAATGGGCGAAAAAAACTCCTACTCCCTATCCAAACCAATGCCTTTGTCACTCCCACCAAGTAGACCTGCGAGG
CTTGCGACTCAGAGGTGAAAAAGTGCTAATTATCGGTGGGGGCTTAACTAGCGGTCACTTAGCATTAGGAGCCTTAAAAC
GAGGCGCAAATGTAACCTTGATGGTCAGACGTCACCTCAAAGAGAAATTATTTGATGCGGAACCCGGTTGGTTAGGTCCA
AAATATTTAAAAGGTTTTAGCGCCGAAACTGACTGGCAAAAACGATGGCAGTTAATTCAAGAAGCACGAGATGGCGGTTC
TATGACACCAGCAGTAATGACTAAGTTACGCCGTTACCAACATCAAGATGAGTTATCTATTTTTGAGGAATGTCAAGTAA
TAAGTGCTGAGTTTGTCAGCGATCGCTGGCAATTAAAATGTGATGATGGAATGATGAGAGAATACCATCGTATCTGGTTA
GCAACAGGTACAAAACTTGATGTTAGAAAACAACCTATCTTAAAAGAAATTTTGCATACCCACCCACTAGAAATAGTGAA
TGGTTTACCAGTATTAGATGAATATTTGCGCTGGTCTGGTTGCGAACTATTTATTATGGGTGGGCTAGCTGCTTTGCAAG
TAGGGCCTGTCGCCAGAAACCTATCGGGGGCAAGAATGGCAAGTGGCCGCATTGTATCAGCATTGAAAAGTTGA

Upstream 100 bases:

>100_bases
AACCAGGGAAAAAATCTACTTTGCGAGTCCTTACAGGTATATATATAATTAATAAAAAAAAGAATGATAATCATTCTTAA
AATTATTGTTTTTTAATTGT

Downstream 100 bases:

>100_bases
GCTATGGAAGAAAAATGTCAAAACCTATAATTACTGTAGTAGCTGGCCCACCGGGTGTCGGCAAAACAAGTTTTATTCGA
AAACAAATCCCTAAAGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSLPIQTKMAIVGAGPHALTLVTHLLQKRKKYHHKIIVFDPSATWMSQWRQQFAAQEIPHLRSPAVHHPDPDPYSLRRFA
ENRPNELFPPYDLPGTKLFQEFSQDVVSRWQLEDKVYKASVTNIVPITYRGNPQFRVELDDGNSTIAGQVIMANGGGKPQ
LPEWAKKTPTPYPNQCLCHSHQVDLRGLRLRGEKVLIIGGGLTSGHLALGALKRGANVTLMVRRHLKEKLFDAEPGWLGP
KYLKGFSAETDWQKRWQLIQEARDGGSMTPAVMTKLRRYQHQDELSIFEECQVISAEFVSDRWQLKCDDGMMREYHRIWL
ATGTKLDVRKQPILKEILHTHPLEIVNGLPVLDEYLRWSGCELFIMGGLAALQVGPVARNLSGARMASGRIVSALKS

Sequences:

>Translated_397_residues
MSLPIQTKMAIVGAGPHALTLVTHLLQKRKKYHHKIIVFDPSATWMSQWRQQFAAQEIPHLRSPAVHHPDPDPYSLRRFA
ENRPNELFPPYDLPGTKLFQEFSQDVVSRWQLEDKVYKASVTNIVPITYRGNPQFRVELDDGNSTIAGQVIMANGGGKPQ
LPEWAKKTPTPYPNQCLCHSHQVDLRGLRLRGEKVLIIGGGLTSGHLALGALKRGANVTLMVRRHLKEKLFDAEPGWLGP
KYLKGFSAETDWQKRWQLIQEARDGGSMTPAVMTKLRRYQHQDELSIFEECQVISAEFVSDRWQLKCDDGMMREYHRIWL
ATGTKLDVRKQPILKEILHTHPLEIVNGLPVLDEYLRWSGCELFIMGGLAALQVGPVARNLSGARMASGRIVSALKS
>Mature_396_residues
SLPIQTKMAIVGAGPHALTLVTHLLQKRKKYHHKIIVFDPSATWMSQWRQQFAAQEIPHLRSPAVHHPDPDPYSLRRFAE
NRPNELFPPYDLPGTKLFQEFSQDVVSRWQLEDKVYKASVTNIVPITYRGNPQFRVELDDGNSTIAGQVIMANGGGKPQL
PEWAKKTPTPYPNQCLCHSHQVDLRGLRLRGEKVLIIGGGLTSGHLALGALKRGANVTLMVRRHLKEKLFDAEPGWLGPK
YLKGFSAETDWQKRWQLIQEARDGGSMTPAVMTKLRRYQHQDELSIFEECQVISAEFVSDRWQLKCDDGMMREYHRIWLA
TGTKLDVRKQPILKEILHTHPLEIVNGLPVLDEYLRWSGCELFIMGGLAALQVGPVARNLSGARMASGRIVSALKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44942; Mature: 44810

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPIQTKMAIVGAGPHALTLVTHLLQKRKKYHHKIIVFDPSATWMSQWRQQFAAQEIPH
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCC
LRSPAVHHPDPDPYSLRRFAENRPNELFPPYDLPGTKLFQEFSQDVVSRWQLEDKVYKAS
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
VTNIVPITYRGNPQFRVELDDGNSTIAGQVIMANGGGKPQLPEWAKKTPTPYPNQCLCHS
CCEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHCCC
HQVDLRGLRLRGEKVLIIGGGLTSGHLALGALKRGANVTLMVRRHLKEKLFDAEPGWLGP
CCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCH
KYLKGFSAETDWQKRWQLIQEARDGGSMTPAVMTKLRRYQHQDELSIFEECQVISAEFVS
HHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
DRWQLKCDDGMMREYHRIWLATGTKLDVRKQPILKEILHTHPLEIVNGLPVLDEYLRWSG
CCEEEECCCCHHHHHHEEEEECCCCCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHCCCC
CELFIMGGLAALQVGPVARNLSGARMASGRIVSALKS
CEEEEECCHHHHHHCHHHHCCCCCHHHCCHHHHHHCC
>Mature Secondary Structure 
SLPIQTKMAIVGAGPHALTLVTHLLQKRKKYHHKIIVFDPSATWMSQWRQQFAAQEIPH
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCC
LRSPAVHHPDPDPYSLRRFAENRPNELFPPYDLPGTKLFQEFSQDVVSRWQLEDKVYKAS
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
VTNIVPITYRGNPQFRVELDDGNSTIAGQVIMANGGGKPQLPEWAKKTPTPYPNQCLCHS
CCEEEEEEEECCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHCCC
HQVDLRGLRLRGEKVLIIGGGLTSGHLALGALKRGANVTLMVRRHLKEKLFDAEPGWLGP
CCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCH
KYLKGFSAETDWQKRWQLIQEARDGGSMTPAVMTKLRRYQHQDELSIFEECQVISAEFVS
HHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
DRWQLKCDDGMMREYHRIWLATGTKLDVRKQPILKEILHTHPLEIVNGLPVLDEYLRWSG
CCEEEECCCCHHHHHHEEEEECCCCCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHCCCC
CELFIMGGLAALQVGPVARNLSGARMASGRIVSALKS
CEEEEECCHHHHHHCHHHHCCCCCHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA