The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113477657

Identifier: 113477657

GI number: 113477657

Start: 6552902

End: 6553891

Strand: Reverse

Name: 113477657

Synonym: Tery_4245

Alternate gene names: NA

Gene position: 6553891-6552902 (Counterclockwise)

Preceding gene: 113477658

Following gene: 113477655

Centisome position: 84.57

GC content: 34.95

Gene sequence:

>990_bases
ATGTCTGAGAAAATTAAAATTTTGATGCTAGGAGATTCAAGTTCAGGCAAAACCTGCTTTATGTTAGGAATGTATGCAGC
TATTCAAAATGGTAGTAAATTCAGTCTCAAGGCAACCGATCCAGATGAAGGCGTTGAAATGGCTACTTTATGGTCAACGA
TCGTGGGCGAATCTGGTGAGGAACGTTGGCCTCGAGGTACCGATACACCTCAAATTTACAACTTTGAACTTTGCTACGCA
TACAAATCATTAATAGAGTTTGAATGGCTGGACTACCGTGGCGGTTCTATGTTAGACATATCCAGTGATGATAACGTTAG
GACACTTAGAAATTATGCTGCTGAATCTAATGGCTTATTCTTCTGTATATCAGGCAAAGATTTAAGGGAGCCAGTTACTG
AGGCTAATCTGCAAAAGATTGCAATGGAAAGTAAAGCTAACCTCATGGGTCAGTATCTGCAATATTTGAATATCAATAGA
AGACCAGCTCGAAAAAAAACTTTTCCAATTGTTATTATTGTTACTAAGTATGACTATTGTTATCATAGAAACAAAATAGA
ATTAATGGAAGATGTCAAAAAAATGTTTCCTCCTTTGTTTGCTCCTAACTCTGATTGGTTAGTAATGATCTGTCCAGTTA
CTTTAGGTAAGGAGCTTGCTAAAAATAGCGATAATGGAAAAATTGAACCTAGAAATCTTGATATTCCTGTAGCTTTTGTC
TTATATTGTATCCTGACAGAACAAGCACGAATACAGGATGAAAAACTCACAGAAATTGATGATCAACTTGAGGTTCTGGA
AAGTAATTTATTTAATCGATGGATTAATAGACGTAGAATTCAGAGACTGAACGAAAGTTTAGGACAAGCAGAAATGCAAT
TACAAAAAACTATAGAAATGATAAATGTACTGGCTAGAGAACAAGATTTAAGTAGTACAGATATTTATTTAAGTGGAAAA
AAGATCCAAATTGATTGGGATTTGAGTTAA

Upstream 100 bases:

>100_bases
TACAACTAAAAATTGAATGACTTCAAAAACCAAAAATAAAAGCAACTATCGTTGATCTTAAAATTTATATATACCAATTA
GTTAAGTTAGAAAGAGCAAC

Downstream 100 bases:

>100_bases
TTTTTAGAGTCGTACAAAATAAATTTCCTCATCGAGAATAGCAATAGGAAACTAGAGGTTAATGAGTAATTAGTTTTCTA
TATCCCATATATTTCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSEKIKILMLGDSSSGKTCFMLGMYAAIQNGSKFSLKATDPDEGVEMATLWSTIVGESGEERWPRGTDTPQIYNFELCYA
YKSLIEFEWLDYRGGSMLDISSDDNVRTLRNYAAESNGLFFCISGKDLREPVTEANLQKIAMESKANLMGQYLQYLNINR
RPARKKTFPIVIIVTKYDYCYHRNKIELMEDVKKMFPPLFAPNSDWLVMICPVTLGKELAKNSDNGKIEPRNLDIPVAFV
LYCILTEQARIQDEKLTEIDDQLEVLESNLFNRWINRRRIQRLNESLGQAEMQLQKTIEMINVLAREQDLSSTDIYLSGK
KIQIDWDLS

Sequences:

>Translated_329_residues
MSEKIKILMLGDSSSGKTCFMLGMYAAIQNGSKFSLKATDPDEGVEMATLWSTIVGESGEERWPRGTDTPQIYNFELCYA
YKSLIEFEWLDYRGGSMLDISSDDNVRTLRNYAAESNGLFFCISGKDLREPVTEANLQKIAMESKANLMGQYLQYLNINR
RPARKKTFPIVIIVTKYDYCYHRNKIELMEDVKKMFPPLFAPNSDWLVMICPVTLGKELAKNSDNGKIEPRNLDIPVAFV
LYCILTEQARIQDEKLTEIDDQLEVLESNLFNRWINRRRIQRLNESLGQAEMQLQKTIEMINVLAREQDLSSTDIYLSGK
KIQIDWDLS
>Mature_328_residues
SEKIKILMLGDSSSGKTCFMLGMYAAIQNGSKFSLKATDPDEGVEMATLWSTIVGESGEERWPRGTDTPQIYNFELCYAY
KSLIEFEWLDYRGGSMLDISSDDNVRTLRNYAAESNGLFFCISGKDLREPVTEANLQKIAMESKANLMGQYLQYLNINRR
PARKKTFPIVIIVTKYDYCYHRNKIELMEDVKKMFPPLFAPNSDWLVMICPVTLGKELAKNSDNGKIEPRNLDIPVAFVL
YCILTEQARIQDEKLTEIDDQLEVLESNLFNRWINRRRIQRLNESLGQAEMQLQKTIEMINVLAREQDLSSTDIYLSGKK
IQIDWDLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37872; Mature: 37741

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKIKILMLGDSSSGKTCFMLGMYAAIQNGSKFSLKATDPDEGVEMATLWSTIVGESGE
CCCCEEEEEEECCCCCCEEEEEHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC
ERWPRGTDTPQIYNFELCYAYKSLIEFEWLDYRGGSMLDISSDDNVRTLRNYAAESNGLF
CCCCCCCCCCEEEEEHHHHHHHHHHHEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCEE
FCISGKDLREPVTEANLQKIAMESKANLMGQYLQYLNINRRPARKKTFPIVIIVTKYDYC
EEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHH
YHRNKIELMEDVKKMFPPLFAPNSDWLVMICPVTLGKELAKNSDNGKIEPRNLDIPVAFV
HCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEECCCCCCCHHHHH
LYCILTEQARIQDEKLTEIDDQLEVLESNLFNRWINRRRIQRLNESLGQAEMQLQKTIEM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INVLAREQDLSSTDIYLSGKKIQIDWDLS
HHHHHHHCCCCCCEEEEECCEEEEEECCC
>Mature Secondary Structure 
SEKIKILMLGDSSSGKTCFMLGMYAAIQNGSKFSLKATDPDEGVEMATLWSTIVGESGE
CCCEEEEEEECCCCCCEEEEEHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC
ERWPRGTDTPQIYNFELCYAYKSLIEFEWLDYRGGSMLDISSDDNVRTLRNYAAESNGLF
CCCCCCCCCCEEEEEHHHHHHHHHHHEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCEE
FCISGKDLREPVTEANLQKIAMESKANLMGQYLQYLNINRRPARKKTFPIVIIVTKYDYC
EEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHH
YHRNKIELMEDVKKMFPPLFAPNSDWLVMICPVTLGKELAKNSDNGKIEPRNLDIPVAFV
HCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEECCCCCCCHHHHH
LYCILTEQARIQDEKLTEIDDQLEVLESNLFNRWINRRRIQRLNESLGQAEMQLQKTIEM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INVLAREQDLSSTDIYLSGKKIQIDWDLS
HHHHHHHCCCCCCEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA