Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477658

Identifier: 113477658

GI number: 113477658

Start: 6553976

End: 6555010

Strand: Reverse

Name: 113477658

Synonym: Tery_4246

Alternate gene names: NA

Gene position: 6555010-6553976 (Counterclockwise)

Preceding gene: 113477680

Following gene: 113477657

Centisome position: 84.58

GC content: 31.3

Gene sequence:

>1035_bases
ATGGACTTATGGTCTGTAATAGTTTACGGTAGAACCAAAGAAGCCGATTATCGTTTTCTGGCCATTCCCAATGATTTTGG
AATAGAAGAAAAGAATTGGGCACGCAAATATATTCATGGGACTACAGTCTATGCAGAGAAGTTACGGGGGAATCCTCGTT
GGTCTCTATTTAAGAATCATAAGCATTGTATTTTCGGCGTGACTTGTATGGTTAGGGAGTTAATTGGTTCCGAACCAGAA
TATAAATATCTGGCCAAGGATGCTGCTGGGCGATCGCTCCATATTTTCGTTGGTTATGTTGCTAGAATCAACAAATATTC
TTTTAATTCATTGAAGATTTTGCCTGGCTTAGAAGACCTTGAATTTTTTAAGTCTGAGTATTTACTAACATCTTTAAAAA
ACCTGTGGTATCTAAAAGATTACCAATTTACTAAAGGAAAGATTCATGCATATCCGTATGAGTTAGTACTAAATTATTCT
AATGTGACAGAATTTAGAGATTATATTAATGTCTTAAATAAATCTATAAACCCAAATTTTATACCATGCTCGGAAGGAGA
AAATCAAGCTTTTATTTGCCCTGACGAACCAGAATATAGACACAATTTGTGGGAAAGTTGTTGTAAGTTCTTTGATTATC
CATATAAATATATAACTCTTTCTCTTTGCCTAGGTATTCCTCGAAAGCAAGATGTTTTACAAGGACCATTTTTAAATGCT
ACAACTTCTGACGCAACTCAACTTATAAAGTTAGTTAAACCGAATTCAAAAGTCATAAATGATTCCTTAAAACCTGACAT
TAAAGATGATTCCAATAGCACAAAAGATGTCTATAATAATTCAATAGATACTTTTGCAAAAAGATTATCAGATTCTATTT
TCTGGAAACATATAACTTGGATATTATTAATCTCAGCTTTTCTTTTTTTTATGCTCTTATTTATCTTTAAAATATATATC
TTAGATATATTTATAAGTATATTAATTGGTTTTTATCTAGGAAGAGTATTTGAGAACAGTACAACTAAAAATTGA

Upstream 100 bases:

>100_bases
TGCGAGGAGTTGGCAAAGAGGTCTTCATTTGAAAACTCAATAAAACAGTAGATAATATATAAATTAGTGTCCCTAAATAC
AAAGCTAGAGGTATAAATTT

Downstream 100 bases:

>100_bases
ATGACTTCAAAAACCAAAAATAAAAGCAACTATCGTTGATCTTAAAATTTATATATACCAATTAGTTAAGTTAGAAAGAG
CAACATGTCTGAGAAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MDLWSVIVYGRTKEADYRFLAIPNDFGIEEKNWARKYIHGTTVYAEKLRGNPRWSLFKNHKHCIFGVTCMVRELIGSEPE
YKYLAKDAAGRSLHIFVGYVARINKYSFNSLKILPGLEDLEFFKSEYLLTSLKNLWYLKDYQFTKGKIHAYPYELVLNYS
NVTEFRDYINVLNKSINPNFIPCSEGENQAFICPDEPEYRHNLWESCCKFFDYPYKYITLSLCLGIPRKQDVLQGPFLNA
TTSDATQLIKLVKPNSKVINDSLKPDIKDDSNSTKDVYNNSIDTFAKRLSDSIFWKHITWILLISAFLFFMLLFIFKIYI
LDIFISILIGFYLGRVFENSTTKN

Sequences:

>Translated_344_residues
MDLWSVIVYGRTKEADYRFLAIPNDFGIEEKNWARKYIHGTTVYAEKLRGNPRWSLFKNHKHCIFGVTCMVRELIGSEPE
YKYLAKDAAGRSLHIFVGYVARINKYSFNSLKILPGLEDLEFFKSEYLLTSLKNLWYLKDYQFTKGKIHAYPYELVLNYS
NVTEFRDYINVLNKSINPNFIPCSEGENQAFICPDEPEYRHNLWESCCKFFDYPYKYITLSLCLGIPRKQDVLQGPFLNA
TTSDATQLIKLVKPNSKVINDSLKPDIKDDSNSTKDVYNNSIDTFAKRLSDSIFWKHITWILLISAFLFFMLLFIFKIYI
LDIFISILIGFYLGRVFENSTTKN
>Mature_344_residues
MDLWSVIVYGRTKEADYRFLAIPNDFGIEEKNWARKYIHGTTVYAEKLRGNPRWSLFKNHKHCIFGVTCMVRELIGSEPE
YKYLAKDAAGRSLHIFVGYVARINKYSFNSLKILPGLEDLEFFKSEYLLTSLKNLWYLKDYQFTKGKIHAYPYELVLNYS
NVTEFRDYINVLNKSINPNFIPCSEGENQAFICPDEPEYRHNLWESCCKFFDYPYKYITLSLCLGIPRKQDVLQGPFLNA
TTSDATQLIKLVKPNSKVINDSLKPDIKDDSNSTKDVYNNSIDTFAKRLSDSIFWKHITWILLISAFLFFMLLFIFKIYI
LDIFISILIGFYLGRVFENSTTKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40290; Mature: 40290

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLWSVIVYGRTKEADYRFLAIPNDFGIEEKNWARKYIHGTTVYAEKLRGNPRWSLFKNH
CCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEHHCCC
KHCIFGVTCMVRELIGSEPEYKYLAKDAAGRSLHIFVGYVARINKYSFNSLKILPGLEDL
CCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCEEECCCCHHH
EFFKSEYLLTSLKNLWYLKDYQFTKGKIHAYPYELVLNYSNVTEFRDYINVLNKSINPNF
HHHHHHHHHHHHHHHEEEECCEECCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCE
IPCSEGENQAFICPDEPEYRHNLWESCCKFFDYPYKYITLSLCLGIPRKQDVLQGPFLNA
EECCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHCCCCCCC
TTSDATQLIKLVKPNSKVINDSLKPDIKDDSNSTKDVYNNSIDTFAKRLSDSIFWKHITW
CCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
ILLISAFLFFMLLFIFKIYILDIFISILIGFYLGRVFENSTTKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDLWSVIVYGRTKEADYRFLAIPNDFGIEEKNWARKYIHGTTVYAEKLRGNPRWSLFKNH
CCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEHHCCC
KHCIFGVTCMVRELIGSEPEYKYLAKDAAGRSLHIFVGYVARINKYSFNSLKILPGLEDL
CCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCEEECCCCHHH
EFFKSEYLLTSLKNLWYLKDYQFTKGKIHAYPYELVLNYSNVTEFRDYINVLNKSINPNF
HHHHHHHHHHHHHHHEEEECCEECCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCE
IPCSEGENQAFICPDEPEYRHNLWESCCKFFDYPYKYITLSLCLGIPRKQDVLQGPFLNA
EECCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHCCCCCCC
TTSDATQLIKLVKPNSKVINDSLKPDIKDDSNSTKDVYNNSIDTFAKRLSDSIFWKHITW
CCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
ILLISAFLFFMLLFIFKIYILDIFISILIGFYLGRVFENSTTKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA