| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is dnaK [H]
Identifier: 113477655
GI number: 113477655
Start: 6549951
End: 6551546
Strand: Reverse
Name: dnaK [H]
Synonym: Tery_4243
Alternate gene names: 113477655
Gene position: 6551546-6549951 (Counterclockwise)
Preceding gene: 113477657
Following gene: 113477654
Centisome position: 84.53
GC content: 32.64
Gene sequence:
>1596_bases ATGAAAATTGGCTTAGATTTCGGAACTACTAATTCAATTATTTCTTTTATTACTAACGATAAACCTGAAGCTTATTCCTA TCCACCATTAAATGGAGAAAAGTATATTCCTTCTTTCATTGCCTATGACTTAGAAGGTATTGAAATAGGGTCTTCAGCTC GGAAAATTGCTGTCTACGATCCTGAGATTGAAACTTACGGTCAATTTAAAATGCGATTGCCGTTACCAGAATCTGAATTT AATCAATATTTTAAGAATAATCGTACTCCTATCAGTGTTACTATTGATTACTTAAAAGAACTATTAATTTCTCCAGATAA TGACTATAGTTTTACTAAAGAACAAGGAGAAATTTCACGTTTAGTTGTTTCAGTGCCAGAAATTTGGCAGCGGGATATTT ATAATCTCGGTAGGGAACGTTTACAGGAGTTAATTAAGAAAGATTTAGGATTAGAAAAACAACTAATTCAACTGGTAAGC GAACCTATAGCAGCAGCATCTTATTATGCTTGGGAAATGCAGCGTCGTGCTCAGGAAGAAAATACTAATCCTTTTCAGGG TAACTTATTAGTTTGCGACATGGGAGGTGGGACATTTGATGTGAGTTTATGTCGAATTTATAGCAACAATAAAATTGAAG TTCTCTACTTTGATGGAGAAGGAGATAAAGGGTTAGAATCTGCTGGGGTTGCTTTCGATAAAAATATTGTTCAAATAGCA TATCAAAAACAATTTGGTGAACAGATTCAGGAAAATGATTCAAAGTTTATTCGCTTACTTAGAGAATTTGAAAATGTTAA AATTGCTAATCATGTAAAAGCTACTAGAAGACTCATAAATTATTTGGATGCTCCAGAAGACAAAGCTAATGATGAAGCTT ATAAATTTGGTGAAGGATATTCGGTTTCTTTAGAGGAGGTTCAGAAAGCATTTACTCCTATTGCTCAAGGAATTCAAAAA GTTATGAAACGAGTTATTGAGCAAATTAAAATCCAAGGTTATTCAATAGATCGTTTATTTATGGTGGGTGGATTTTCTCA GTTTATTTTAGTGCAAGAAGAGATTAAAAATATTTTGGGTTTTGAGAGAAATGATGTGCGAATTGAGCAAAGTTTTAATA TTACTAATAGTGCTTATGCTATCTCTTATGGTGCTTGTTTGATTGCTAATGGTTTAGTTGAGCCTACAGAAAAATATGTT CATACTTTAGGTATTATCTTAGAAACAATTGCTCTTACAGGAGAAAGAGATAAAATAAATATTCCTTTGATTAAAGGAGG TTCTAGTTTAGATAGTTTGGCAGAGACAAATTTTTATGAGAAAGAAATTGAACCAATAGAACGACGAGTAACTGTTACTT TGTGGGTCCAAATTCAATCTAAAGGTTTTAAACATCAAAACTCTCTGGCAGATATGATTGAGTTACCTAATTATTCTCCT AATACAAAATATCGAGTTGGTATGAAGGTAGACCGCTCTCACATAGCTTATTTAGTAATCGAAAGTCAAGGAGGAGAAAG CAAAATTGAATATGAGTTGGGTGAGATAATTTCTAAAATGTTTCCTGGTTATATACTCAAACCTGATGAGGATTGA
Upstream 100 bases:
>100_bases GCGATCAAAAAAATCCCTAACTGAACTATATGGTTCTATAGACTCATTTACTTTCTCTCTTCCTTTTTCCTTCTTCCTAC TTTTTTCTTCTTTATATATT
Downstream 100 bases:
>100_bases AAATATAATATTTGTCTGATATTTACCTACTATACCTATTATTAAGTGATGAATTTACTACCAGAACAACAACAAGAAAT GCAACAAGAAATACAACGAT
Product: molecular chaperone-like
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MKIGLDFGTTNSIISFITNDKPEAYSYPPLNGEKYIPSFIAYDLEGIEIGSSARKIAVYDPEIETYGQFKMRLPLPESEF NQYFKNNRTPISVTIDYLKELLISPDNDYSFTKEQGEISRLVVSVPEIWQRDIYNLGRERLQELIKKDLGLEKQLIQLVS EPIAAASYYAWEMQRRAQEENTNPFQGNLLVCDMGGGTFDVSLCRIYSNNKIEVLYFDGEGDKGLESAGVAFDKNIVQIA YQKQFGEQIQENDSKFIRLLREFENVKIANHVKATRRLINYLDAPEDKANDEAYKFGEGYSVSLEEVQKAFTPIAQGIQK VMKRVIEQIKIQGYSIDRLFMVGGFSQFILVQEEIKNILGFERNDVRIEQSFNITNSAYAISYGACLIANGLVEPTEKYV HTLGIILETIALTGERDKINIPLIKGGSSLDSLAETNFYEKEIEPIERRVTVTLWVQIQSKGFKHQNSLADMIELPNYSP NTKYRVGMKVDRSHIAYLVIESQGGESKIEYELGEIISKMFPGYILKPDED
Sequences:
>Translated_531_residues MKIGLDFGTTNSIISFITNDKPEAYSYPPLNGEKYIPSFIAYDLEGIEIGSSARKIAVYDPEIETYGQFKMRLPLPESEF NQYFKNNRTPISVTIDYLKELLISPDNDYSFTKEQGEISRLVVSVPEIWQRDIYNLGRERLQELIKKDLGLEKQLIQLVS EPIAAASYYAWEMQRRAQEENTNPFQGNLLVCDMGGGTFDVSLCRIYSNNKIEVLYFDGEGDKGLESAGVAFDKNIVQIA YQKQFGEQIQENDSKFIRLLREFENVKIANHVKATRRLINYLDAPEDKANDEAYKFGEGYSVSLEEVQKAFTPIAQGIQK VMKRVIEQIKIQGYSIDRLFMVGGFSQFILVQEEIKNILGFERNDVRIEQSFNITNSAYAISYGACLIANGLVEPTEKYV HTLGIILETIALTGERDKINIPLIKGGSSLDSLAETNFYEKEIEPIERRVTVTLWVQIQSKGFKHQNSLADMIELPNYSP NTKYRVGMKVDRSHIAYLVIESQGGESKIEYELGEIISKMFPGYILKPDED >Mature_531_residues MKIGLDFGTTNSIISFITNDKPEAYSYPPLNGEKYIPSFIAYDLEGIEIGSSARKIAVYDPEIETYGQFKMRLPLPESEF NQYFKNNRTPISVTIDYLKELLISPDNDYSFTKEQGEISRLVVSVPEIWQRDIYNLGRERLQELIKKDLGLEKQLIQLVS EPIAAASYYAWEMQRRAQEENTNPFQGNLLVCDMGGGTFDVSLCRIYSNNKIEVLYFDGEGDKGLESAGVAFDKNIVQIA YQKQFGEQIQENDSKFIRLLREFENVKIANHVKATRRLINYLDAPEDKANDEAYKFGEGYSVSLEEVQKAFTPIAQGIQK VMKRVIEQIKIQGYSIDRLFMVGGFSQFILVQEEIKNILGFERNDVRIEQSFNITNSAYAISYGACLIANGLVEPTEKYV HTLGIILETIALTGERDKINIPLIKGGSSLDSLAETNFYEKEIEPIERRVTVTLWVQIQSKGFKHQNSLADMIELPNYSP NTKYRVGMKVDRSHIAYLVIESQGGESKIEYELGEIISKMFPGYILKPDED
Specific function: Acts as a chaperone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Homo sapiens, GI16507237, Length=418, Percent_Identity=25.1196172248804, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17534771, Length=439, Percent_Identity=25.0569476082005, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17568549, Length=418, Percent_Identity=25.3588516746411, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322426, Length=511, Percent_Identity=23.091976516634, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24641406, Length=421, Percent_Identity=25.41567695962, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641408, Length=421, Percent_Identity=25.41567695962, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641402, Length=421, Percent_Identity=25.41567695962, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641404, Length=421, Percent_Identity=25.41567695962, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 60517; Mature: 60517
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGLDFGTTNSIISFITNDKPEAYSYPPLNGEKYIPSFIAYDLEGIEIGSSARKIAVYD CEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCEEEEEC PEIETYGQFKMRLPLPESEFNQYFKNNRTPISVTIDYLKELLISPDNDYSFTKEQGEISR CCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHH LVVSVPEIWQRDIYNLGRERLQELIKKDLGLEKQLIQLVSEPIAAASYYAWEMQRRAQEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTNPFQGNLLVCDMGGGTFDVSLCRIYSNNKIEVLYFDGEGDKGLESAGVAFDKNIVQIA CCCCCCCCEEEEECCCCEEEEEEEEEECCCEEEEEEEECCCCCCCHHCCCEECCHHHHHH YQKQFGEQIQENDSKFIRLLREFENVKIANHVKATRRLINYLDAPEDKANDEAYKFGEGY HHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCC SVSLEEVQKAFTPIAQGIQKVMKRVIEQIKIQGYSIDRLFMVGGFSQFILVQEEIKNILG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHEEEHHHHHHHHC FERNDVRIEQSFNITNSAYAISYGACLIANGLVEPTEKYVHTLGIILETIALTGERDKIN CCCCCEEEEEECCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE IPLIKGGSSLDSLAETNFYEKEIEPIERRVTVTLWVQIQSKGFKHQNSLADMIELPNYSP EEEEECCCCHHHHHHCCCHHHHHHHHHCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCC NTKYRVGMKVDRSHIAYLVIESQGGESKIEYELGEIISKMFPGYILKPDED CCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure MKIGLDFGTTNSIISFITNDKPEAYSYPPLNGEKYIPSFIAYDLEGIEIGSSARKIAVYD CEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCEEEEEC PEIETYGQFKMRLPLPESEFNQYFKNNRTPISVTIDYLKELLISPDNDYSFTKEQGEISR CCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHH LVVSVPEIWQRDIYNLGRERLQELIKKDLGLEKQLIQLVSEPIAAASYYAWEMQRRAQEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTNPFQGNLLVCDMGGGTFDVSLCRIYSNNKIEVLYFDGEGDKGLESAGVAFDKNIVQIA CCCCCCCCEEEEECCCCEEEEEEEEEECCCEEEEEEEECCCCCCCHHCCCEECCHHHHHH YQKQFGEQIQENDSKFIRLLREFENVKIANHVKATRRLINYLDAPEDKANDEAYKFGEGY HHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCC SVSLEEVQKAFTPIAQGIQKVMKRVIEQIKIQGYSIDRLFMVGGFSQFILVQEEIKNILG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHEEEHHHHHHHHC FERNDVRIEQSFNITNSAYAISYGACLIANGLVEPTEKYVHTLGIILETIALTGERDKIN CCCCCEEEEEECCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE IPLIKGGSSLDSLAETNFYEKEIEPIERRVTVTLWVQIQSKGFKHQNSLADMIELPNYSP EEEEECCCCHHHHHHCCCHHHHHHHHHCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCC NTKYRVGMKVDRSHIAYLVIESQGGESKIEYELGEIISKMFPGYILKPDED CCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA