Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477632

Identifier: 113477632

GI number: 113477632

Start: 6506622

End: 6509042

Strand: Reverse

Name: 113477632

Synonym: Tery_4219

Alternate gene names: NA

Gene position: 6509042-6506622 (Counterclockwise)

Preceding gene: 113477633

Following gene: 113477631

Centisome position: 83.99

GC content: 36.6

Gene sequence:

>2421_bases
GTGACTCAAGAATTTCATGTTTCAATTACTCCCTTGGGAGAAGACGAATATTTTGTCCGGACAGAAAAAGTCCCTGTTGG
AGGCCCAGTGGCAGAAGAAATAGTCCAATGGCCTGTAGAAAAATGGCTAACTCAAGCCCGTCAACTATTTCGTGATCCAT
TAACTGATCTTCTAGAAGAAAAGTCCAACTCTCAGGTAGTGATCCCTAATCAGATTATGTCCAGGTCTGGGGAAGTAGTA
AGTCCAAGTTTAGTAGCATTAGGCCAAGAAATGTATCAAGAACTATTCAAAGATAGCCTGAGAGATAGTTGGAATTGTGC
CCAAGGAATCGCTCACAATCGAGGTGAGGTTTTACAGTTACGTTTAGGTACTAAAGACAGATATCTATCTAGTTTGCCTT
GGGAGGTACTCCATGTAGGCGATCGCCCCCTGGCGACTGGTACTGACATTGTCTTCTCCCGATATCAACCTAATACCTGC
TTACGGAAACTTAACCGGATATTAACACCTGAAGAACCATTAAAAATTTTAATGGCGATCGCGGTTCCCAGTGATAAGGA
TAGTCTAGAACTGGAAAAAGAATATAAGGTATTACAAGAAGAACTGCAAAAAAATAGTGGGGCAACTCAGATTTACCTAG
ACATTCTCCGGCAACCAGGGCGAGAACAACTTACCCAAGCATTAGAACAAGGTAAATATCAAGTTTTCCACTATGCAGGT
CATAGCAACTGGGGTATTTCGGGTGGTGAAATATCTTTAGTGAGTAATATAACAGGTTTAGCAGAAAGTCTGAGTGGTAA
GGATCTGTCAGGTTTGCTAGTTAACAATGGCATTCAGATGGCGATCTTCAACTCATGTCGAGGTGCGTATAACCATCTTA
TTGAACCTACTGATGAGGGAATAGAGCTCAACTTAGCAGAAGCGATGGTCAAACGGGGAATTCCTGGGGTGCTAGCAATG
GCAGAACGTATTCCAGATGAAGTTTCTCTTATCCTAACACGTTTGTTTTATCGTAATCTCAATCAGGGTTATCCGATAGA
CTTAAGTTTAAATCGGGCAAGACAAGGTTTGATTTCTGCCTATGGTTCACATCAACTTTACTGGGCATTGCCTGTTGTTT
ATCTACATCAAGATTTTGGTGGATATCTAATTGAAAAACAAAGCGATTCTCAAAATGAAATACAAGAGGATATCCTGACG
TCTATTGATGAAAAAATTGAAACTCCGAATTTATCAGAAAATTTAAATCCCGTACAACCAGATATTGATTTAGGGAACCT
GGATGAGGATCCTACTATGGCTAAAAATGATAATTTAAATTTCCAGTTTCAAGACAGTAAATATCAAGTTATGACACTTG
AAGATATATTGCCAGAAAAAGAAGATATATTGCCAGAAAAAGAAATAGGAAGGCAAATAAATAATCAAGACTATGAAAAA
CAAGAAGATTTAATAACACCTACACAAAGTAGTGAAGAATCAACTCATTTAATATTCACGACATCAAAGACTAAAAATAA
GTCTCATAAGTTTCTTTGGCAAACAAGATTTACATTATTAACATTAGGATATGCAATTTCAGGAATAATATTATTTTTGG
GAATTAACTACATTGTTTTCAATAATCGTCAATCAATAATGAGTGCTGAATTACCTAAAGCACCTGCTCCAGCTATCAAA
TATAAATACAACAGAGTTAGACTTGTTAATCAGACAATTAATACTACCCCAGAAGTACAGAACATGGCAATTCAACAGTT
TAATCAAAATGAGCTTCGAGCTGGTAAAATGGTAGTAGAAACATTATTAGAAGAAGGAGAATTATCTCAAGCAGCAGAAG
TTATAGCTGTTGTGCCAGAAAAGCTTAGTGAAGATCGAGAAATTAATTTTCTTAAAGGTCGATTAGCTTGGGAATTATTC
CAAGATAGAAATCAACATAATCTGATAGATGAAGCTATAAATTATTGGGAAAAAGCTGCTGCCCAGAGCCAAGAAAATCT
TCAATATCAAAATGCTTTAGGCTTTGCTTATTACACTAAAGGAGATATAGAAAAAGCCTATGCAGCTTGGTTAAAAGTGT
TGCATTTATCTGGAGAAATTGCCCCAGAAATAAAAAATGTTAGCCCTGTTTCTCATAACTACATGGGAAATTTATCTGTC
AAGAATAGAGAAGTTCTAAATGCTTATGCAGGTCTAGGATTAGTTACCCTTAAATATGCTCAAAATTTACAAAAAATTCC
TGATAAAGCTTTTAAATATGCTAGTAAAGTTATGAGAGAAGCTGGCCAAGAGTTTCATGTCCTACAACTACAAAAAAATT
GGTTGTGGTCTCCTAAAGCACGTCAAGATTGGGATTTACTATTGAAACTTCGAGAAAGGCAACAATTTGAACATAATAAA
AAACCAGAAGAGCTGGCTTAG

Upstream 100 bases:

>100_bases
ACCAAAACCAAAGCGCGTCAAATATTTCCCATTTATTCACGGTTAAAAGCGAAGATCGGGAGTTTTGACGAAATAATTTG
AGTAAAAGGATAGAAAACAA

Downstream 100 bases:

>100_bases
TAATAGTAATGTTAGAGCCAGTGACAGTTTATAGCTGAAGTCTGAAGTAGTTCAGTTAAATTCGCAGCATGGGGGTGAAA
ATATACTAAGCGCCCTGGTG

Product: heterocyst differentiation protein

Products: NA

Alternate protein names: Heterocyst Differentiation Protein; TPR Repeat-Containing Protein; Heterocyst Differentiation Protein HetF; FHA Domain Containing Protein; SEFIR Domain Protein; Tetratricopeptide Repeat-Containing Protein; HEAT Repeat-Containing PBS Lyase; Tetratricopeptide Repeat Domain Protein; FHA Domain Protein

Number of amino acids: Translated: 806; Mature: 805

Protein sequence:

>806_residues
MTQEFHVSITPLGEDEYFVRTEKVPVGGPVAEEIVQWPVEKWLTQARQLFRDPLTDLLEEKSNSQVVIPNQIMSRSGEVV
SPSLVALGQEMYQELFKDSLRDSWNCAQGIAHNRGEVLQLRLGTKDRYLSSLPWEVLHVGDRPLATGTDIVFSRYQPNTC
LRKLNRILTPEEPLKILMAIAVPSDKDSLELEKEYKVLQEELQKNSGATQIYLDILRQPGREQLTQALEQGKYQVFHYAG
HSNWGISGGEISLVSNITGLAESLSGKDLSGLLVNNGIQMAIFNSCRGAYNHLIEPTDEGIELNLAEAMVKRGIPGVLAM
AERIPDEVSLILTRLFYRNLNQGYPIDLSLNRARQGLISAYGSHQLYWALPVVYLHQDFGGYLIEKQSDSQNEIQEDILT
SIDEKIETPNLSENLNPVQPDIDLGNLDEDPTMAKNDNLNFQFQDSKYQVMTLEDILPEKEDILPEKEIGRQINNQDYEK
QEDLITPTQSSEESTHLIFTTSKTKNKSHKFLWQTRFTLLTLGYAISGIILFLGINYIVFNNRQSIMSAELPKAPAPAIK
YKYNRVRLVNQTINTTPEVQNMAIQQFNQNELRAGKMVVETLLEEGELSQAAEVIAVVPEKLSEDREINFLKGRLAWELF
QDRNQHNLIDEAINYWEKAAAQSQENLQYQNALGFAYYTKGDIEKAYAAWLKVLHLSGEIAPEIKNVSPVSHNYMGNLSV
KNREVLNAYAGLGLVTLKYAQNLQKIPDKAFKYASKVMREAGQEFHVLQLQKNWLWSPKARQDWDLLLKLRERQQFEHNK
KPEELA

Sequences:

>Translated_806_residues
MTQEFHVSITPLGEDEYFVRTEKVPVGGPVAEEIVQWPVEKWLTQARQLFRDPLTDLLEEKSNSQVVIPNQIMSRSGEVV
SPSLVALGQEMYQELFKDSLRDSWNCAQGIAHNRGEVLQLRLGTKDRYLSSLPWEVLHVGDRPLATGTDIVFSRYQPNTC
LRKLNRILTPEEPLKILMAIAVPSDKDSLELEKEYKVLQEELQKNSGATQIYLDILRQPGREQLTQALEQGKYQVFHYAG
HSNWGISGGEISLVSNITGLAESLSGKDLSGLLVNNGIQMAIFNSCRGAYNHLIEPTDEGIELNLAEAMVKRGIPGVLAM
AERIPDEVSLILTRLFYRNLNQGYPIDLSLNRARQGLISAYGSHQLYWALPVVYLHQDFGGYLIEKQSDSQNEIQEDILT
SIDEKIETPNLSENLNPVQPDIDLGNLDEDPTMAKNDNLNFQFQDSKYQVMTLEDILPEKEDILPEKEIGRQINNQDYEK
QEDLITPTQSSEESTHLIFTTSKTKNKSHKFLWQTRFTLLTLGYAISGIILFLGINYIVFNNRQSIMSAELPKAPAPAIK
YKYNRVRLVNQTINTTPEVQNMAIQQFNQNELRAGKMVVETLLEEGELSQAAEVIAVVPEKLSEDREINFLKGRLAWELF
QDRNQHNLIDEAINYWEKAAAQSQENLQYQNALGFAYYTKGDIEKAYAAWLKVLHLSGEIAPEIKNVSPVSHNYMGNLSV
KNREVLNAYAGLGLVTLKYAQNLQKIPDKAFKYASKVMREAGQEFHVLQLQKNWLWSPKARQDWDLLLKLRERQQFEHNK
KPEELA
>Mature_805_residues
TQEFHVSITPLGEDEYFVRTEKVPVGGPVAEEIVQWPVEKWLTQARQLFRDPLTDLLEEKSNSQVVIPNQIMSRSGEVVS
PSLVALGQEMYQELFKDSLRDSWNCAQGIAHNRGEVLQLRLGTKDRYLSSLPWEVLHVGDRPLATGTDIVFSRYQPNTCL
RKLNRILTPEEPLKILMAIAVPSDKDSLELEKEYKVLQEELQKNSGATQIYLDILRQPGREQLTQALEQGKYQVFHYAGH
SNWGISGGEISLVSNITGLAESLSGKDLSGLLVNNGIQMAIFNSCRGAYNHLIEPTDEGIELNLAEAMVKRGIPGVLAMA
ERIPDEVSLILTRLFYRNLNQGYPIDLSLNRARQGLISAYGSHQLYWALPVVYLHQDFGGYLIEKQSDSQNEIQEDILTS
IDEKIETPNLSENLNPVQPDIDLGNLDEDPTMAKNDNLNFQFQDSKYQVMTLEDILPEKEDILPEKEIGRQINNQDYEKQ
EDLITPTQSSEESTHLIFTTSKTKNKSHKFLWQTRFTLLTLGYAISGIILFLGINYIVFNNRQSIMSAELPKAPAPAIKY
KYNRVRLVNQTINTTPEVQNMAIQQFNQNELRAGKMVVETLLEEGELSQAAEVIAVVPEKLSEDREINFLKGRLAWELFQ
DRNQHNLIDEAINYWEKAAAQSQENLQYQNALGFAYYTKGDIEKAYAAWLKVLHLSGEIAPEIKNVSPVSHNYMGNLSVK
NREVLNAYAGLGLVTLKYAQNLQKIPDKAFKYASKVMREAGQEFHVLQLQKNWLWSPKARQDWDLLLKLRERQQFEHNKK
PEELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91804; Mature: 91673

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEFHVSITPLGEDEYFVRTEKVPVGGPVAEEIVQWPVEKWLTQARQLFRDPLTDLLEE
CCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSNSQVVIPNQIMSRSGEVVSPSLVALGQEMYQELFKDSLRDSWNCAQGIAHNRGEVLQL
CCCCEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEE
RLGTKDRYLSSLPWEVLHVGDRPLATGTDIVFSRYQPNTCLRKLNRILTPEEPLKILMAI
EECCCHHHHHHCCHHHEECCCCCCCCCCHHEEECCCCHHHHHHHHHHCCCCHHHHEEEEE
AVPSDKDSLELEKEYKVLQEELQKNSGATQIYLDILRQPGREQLTQALEQGKYQVFHYAG
ECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEC
HSNWGISGGEISLVSNITGLAESLSGKDLSGLLVNNGIQMAIFNSCRGAYNHLIEPTDEG
CCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEECCCEEEEEHHHHHHHHHHCCCCCCCC
IELNLAEAMVKRGIPGVLAMAERIPDEVSLILTRLFYRNLNQGYPIDLSLNRARQGLISA
CEEEHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
YGSHQLYWALPVVYLHQDFGGYLIEKQSDSQNEIQEDILTSIDEKIETPNLSENLNPVQP
CCCCEEEEHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DIDLGNLDEDPTMAKNDNLNFQFQDSKYQVMTLEDILPEKEDILPEKEIGRQINNQDYEK
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEHHHHCCCHHHCCCHHHHHHHCCCCCCHH
QEDLITPTQSSEESTHLIFTTSKTKNKSHKFLWQTRFTLLTLGYAISGIILFLGINYIVF
HHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NNRQSIMSAELPKAPAPAIKYKYNRVRLVNQTINTTPEVQNMAIQQFNQNELRAGKMVVE
CCCHHHHHHCCCCCCCCHHEEECCEEEEEEHHCCCCCHHHHHHHHHCCCHHHHHHHHHHH
TLLEEGELSQAAEVIAVVPEKLSEDREINFLKGRLAWELFQDRNQHNLIDEAINYWEKAA
HHHHCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQSQENLQYQNALGFAYYTKGDIEKAYAAWLKVLHLSGEIAPEIKNVSPVSHNYMGNLSV
HCCHHHCHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
KNREVLNAYAGLGLVTLKYAQNLQKIPDKAFKYASKVMREAGQEFHVLQLQKNWLWSPKA
CHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
RQDWDLLLKLRERQQFEHNKKPEELA
CCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQEFHVSITPLGEDEYFVRTEKVPVGGPVAEEIVQWPVEKWLTQARQLFRDPLTDLLEE
CCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSNSQVVIPNQIMSRSGEVVSPSLVALGQEMYQELFKDSLRDSWNCAQGIAHNRGEVLQL
CCCCEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEE
RLGTKDRYLSSLPWEVLHVGDRPLATGTDIVFSRYQPNTCLRKLNRILTPEEPLKILMAI
EECCCHHHHHHCCHHHEECCCCCCCCCCHHEEECCCCHHHHHHHHHHCCCCHHHHEEEEE
AVPSDKDSLELEKEYKVLQEELQKNSGATQIYLDILRQPGREQLTQALEQGKYQVFHYAG
ECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEC
HSNWGISGGEISLVSNITGLAESLSGKDLSGLLVNNGIQMAIFNSCRGAYNHLIEPTDEG
CCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEECCCEEEEEHHHHHHHHHHCCCCCCCC
IELNLAEAMVKRGIPGVLAMAERIPDEVSLILTRLFYRNLNQGYPIDLSLNRARQGLISA
CEEEHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
YGSHQLYWALPVVYLHQDFGGYLIEKQSDSQNEIQEDILTSIDEKIETPNLSENLNPVQP
CCCCEEEEHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DIDLGNLDEDPTMAKNDNLNFQFQDSKYQVMTLEDILPEKEDILPEKEIGRQINNQDYEK
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEHHHHCCCHHHCCCHHHHHHHCCCCCCHH
QEDLITPTQSSEESTHLIFTTSKTKNKSHKFLWQTRFTLLTLGYAISGIILFLGINYIVF
HHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NNRQSIMSAELPKAPAPAIKYKYNRVRLVNQTINTTPEVQNMAIQQFNQNELRAGKMVVE
CCCHHHHHHCCCCCCCCHHEEECCEEEEEEHHCCCCCHHHHHHHHHCCCHHHHHHHHHHH
TLLEEGELSQAAEVIAVVPEKLSEDREINFLKGRLAWELFQDRNQHNLIDEAINYWEKAA
HHHHCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQSQENLQYQNALGFAYYTKGDIEKAYAAWLKVLHLSGEIAPEIKNVSPVSHNYMGNLSV
HCCHHHCHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
KNREVLNAYAGLGLVTLKYAQNLQKIPDKAFKYASKVMREAGQEFHVLQLQKNWLWSPKA
CHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
RQDWDLLLKLRERQQFEHNKKPEELA
CCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA