Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477631

Identifier: 113477631

GI number: 113477631

Start: 6504895

End: 6505806

Strand: Reverse

Name: 113477631

Synonym: Tery_4218

Alternate gene names: NA

Gene position: 6505806-6504895 (Counterclockwise)

Preceding gene: 113477632

Following gene: 113477629

Centisome position: 83.94

GC content: 33.66

Gene sequence:

>912_bases
ATGACACAAAAACATGAAAATATTATCAATTTTTTTAACTCAGTTCCTGGGAGAATACTCTCACACCTAATTGCTGTTTT
GTTAACTTTAGGTGGTGTTTGGTTGTTTCAAAATCGACCATTAAATTTTTCAGAAACTATACCTTTGACTCCCGACCCAA
TTAACCTTGAACGATATAATAAAGAAAAACCTATTAATTATAGTCCAAATACTGTAGAAGCAGAAAAACAATTAGCTATT
GAACAGTTTAAAAAAAATGATATTAAAGTTGGCAAAAAAGCTATTGAATCTCTGCTAAATAGAGGCGCTTTTTTAGAGGC
AAAAGAAGCTCTTAATATTGTCAGAAATGCACCTAAGAATAACAATCAGATTGATCCTGACATCAATTTTTTATATGGTC
GATTGGTTTGGGAGTTAGCCCAAGATGGAAATAGAAATTATTCTGTAGATGAAGCTTTATATTTCTGGGAAAAAGCAATT
TCTGAAAGTCCTGATTATGTTCTATATCAAAATGCTATAGGTTTTGCTTATTATACGAAAGGGGAATTGAAAAAAGCTTA
TGATGCTTGGTTCAAAGTATTAGAATTATCAGGAGAAACTTTACCAGAAACATTGCAGAACATGTCGACTGAAGATATTA
CTACTCCAGAAGTTGAACAAAAACATGCTCTTAATGCTTATGCAGGTATTGGATTAGTCATGATGAAATCTGCTCTGACT
TCTCAAGGAGATGAGCAGAGAGAACGCTGGTTGAGAGCGCTTCAATATCGGACAAAGGTAATGAATGAAGCTGCCAGAGA
ATATCATATTCCTCAACTGCGGCAAAATTGGTTATGGTCGCGAGTGGCACTACGAGATTGGGATTTTTTGATGAGAACAG
ATTGGAATATTTTAAGAAAAAGAAATAATTGA

Upstream 100 bases:

>100_bases
AAGAAAAATTTTGAATAGCTTACCTAATTAAAGTAGTAATGGTTAGATATATTGAAAGTTTATTTTTCAAATGACTCATC
TAATTATATAAAATATCACC

Downstream 100 bases:

>100_bases
TATTTTATCATGTTCCTTGAAGCATTAAGATAATAGATATATTATAAATAATTAAATTTGTATAAAAGTTTGGCTTGAAA
CTGATCAAGAAAAGATTGGT

Product: heterocyst differentiation protein

Products: NA

Alternate protein names: Heterocyst Differentiation Protein HetF; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTQKHENIINFFNSVPGRILSHLIAVLLTLGGVWLFQNRPLNFSETIPLTPDPINLERYNKEKPINYSPNTVEAEKQLAI
EQFKKNDIKVGKKAIESLLNRGAFLEAKEALNIVRNAPKNNNQIDPDINFLYGRLVWELAQDGNRNYSVDEALYFWEKAI
SESPDYVLYQNAIGFAYYTKGELKKAYDAWFKVLELSGETLPETLQNMSTEDITTPEVEQKHALNAYAGIGLVMMKSALT
SQGDEQRERWLRALQYRTKVMNEAAREYHIPQLRQNWLWSRVALRDWDFLMRTDWNILRKRNN

Sequences:

>Translated_303_residues
MTQKHENIINFFNSVPGRILSHLIAVLLTLGGVWLFQNRPLNFSETIPLTPDPINLERYNKEKPINYSPNTVEAEKQLAI
EQFKKNDIKVGKKAIESLLNRGAFLEAKEALNIVRNAPKNNNQIDPDINFLYGRLVWELAQDGNRNYSVDEALYFWEKAI
SESPDYVLYQNAIGFAYYTKGELKKAYDAWFKVLELSGETLPETLQNMSTEDITTPEVEQKHALNAYAGIGLVMMKSALT
SQGDEQRERWLRALQYRTKVMNEAAREYHIPQLRQNWLWSRVALRDWDFLMRTDWNILRKRNN
>Mature_302_residues
TQKHENIINFFNSVPGRILSHLIAVLLTLGGVWLFQNRPLNFSETIPLTPDPINLERYNKEKPINYSPNTVEAEKQLAIE
QFKKNDIKVGKKAIESLLNRGAFLEAKEALNIVRNAPKNNNQIDPDINFLYGRLVWELAQDGNRNYSVDEALYFWEKAIS
ESPDYVLYQNAIGFAYYTKGELKKAYDAWFKVLELSGETLPETLQNMSTEDITTPEVEQKHALNAYAGIGLVMMKSALTS
QGDEQRERWLRALQYRTKVMNEAAREYHIPQLRQNWLWSRVALRDWDFLMRTDWNILRKRNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35316; Mature: 35184

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKHENIINFFNSVPGRILSHLIAVLLTLGGVWLFQNRPLNFSETIPLTPDPINLERYN
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHCC
KEKPINYSPNTVEAEKQLAIEQFKKNDIKVGKKAIESLLNRGAFLEAKEALNIVRNAPKN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NNQIDPDINFLYGRLVWELAQDGNRNYSVDEALYFWEKAISESPDYVLYQNAIGFAYYTK
CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEECH
GELKKAYDAWFKVLELSGETLPETLQNMSTEDITTPEVEQKHALNAYAGIGLVMMKSALT
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SQGDEQRERWLRALQYRTKVMNEAAREYHIPQLRQNWLWSRVALRDWDFLMRTDWNILRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
RNN
CCC
>Mature Secondary Structure 
TQKHENIINFFNSVPGRILSHLIAVLLTLGGVWLFQNRPLNFSETIPLTPDPINLERYN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHCC
KEKPINYSPNTVEAEKQLAIEQFKKNDIKVGKKAIESLLNRGAFLEAKEALNIVRNAPKN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NNQIDPDINFLYGRLVWELAQDGNRNYSVDEALYFWEKAISESPDYVLYQNAIGFAYYTK
CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEECH
GELKKAYDAWFKVLELSGETLPETLQNMSTEDITTPEVEQKHALNAYAGIGLVMMKSALT
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SQGDEQRERWLRALQYRTKVMNEAAREYHIPQLRQNWLWSRVALRDWDFLMRTDWNILRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
RNN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA