| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476814
Identifier: 113476814
GI number: 113476814
Start: 5052127
End: 5053260
Strand: Reverse
Name: 113476814
Synonym: Tery_3294
Alternate gene names: NA
Gene position: 5053260-5052127 (Counterclockwise)
Preceding gene: 113476815
Following gene: 113476813
Centisome position: 65.2
GC content: 33.07
Gene sequence:
>1134_bases ATGAAATTCAACCGTCGTTACTTCCTAATTTCTCTCAGTAGCGGATTAGGATTAGCTTTTTATTCCTACAATAATTTACA GCAAACTCCAACTACAAAGCTTAAAAAGGTTAATTCTAAAACTACTGCAAATGCCCCTGTTTATTCCTCAGAAATTCCTA CTCCTTCAGCACCAGCTACTAAAGGAATATTTGCCCCTAAGCGAGGAGAAGTTCGACTAGTAGTTATTAGCGATTTAAAC AGTAGTTATGGCTCTACAACTTACCAAATACAAGTTGAAAAAACTATGACTCTAATTCCTGAATTGCAGCCAGATTTATT ACTTTGCGCAGGTGATATGATTGCCGGACAAAAACTATCACTTACTGAAGAAAATATTGAAGATATGTGGTCAGCTTTTG ATCGCTATATTGCGAAACCATTACGTCAAGCTAAACAACCTTTTTGTATGACTATGGGTAACCATGATGCTTCTGGTTAT TTTAAAAAATCTGGGGATGGATATATGTATGAAAAAGAACGTATACAAGCACAAATTTATTGGATAAAACATAAAAATGA TTTAAACATAAATTTTTTAGAAGCAGATGGATTTCCTTTTTATTACAGTTTTATTCATCAAGAAATTTTCTATTTAATTT GGGATGCTTCTACATTTGATATTCCTACTAAACAATTAGAATGGGTAAAAAAAAGTCTGGCAAGTAGTCAAGCACAAACA GCAAAGATGAGAATTGTCATGGGACATTTACCTCTCTATGCTGTGGCAGTTGGTAAAAATAAGTTTGGTGATGTTTTGAC TGAAACTGAGAAGTTACAAAACCTGTTAGAAAAATATAATGTACATCTATATATTAGCGGTCATCATCATGCTTATTTTC CTGGTTATAAGGGTAATTTAAAATTGCTACATACTGGTGCTTTAGGTAGCGGACCTCGTGTTTTACTTAATAGTAATTTA CCCCCTAGAAATACTTTGACTGTTTTGGATATTAACCTAGAACTAAATCAGAGTTTTTATACTACTTATGATCTGAAAAC GATGAGAGTTGTTCATCTGCAAGAATTACCAGAAAAAATTACTGGTTTGAATGGTTGGGTTTTACGAGAACCAAAAGTAA TGTTGCCTAATTAA
Upstream 100 bases:
>100_bases TAGGATTTGATATATTTTCTTGAAATTCCTGTACGGTAAAAGTTTTGAGACTATGAATTGATAGGTAACAATTAAGCCAA TTAATTTTGAATAAAAAAAA
Downstream 100 bases:
>100_bases CAAAGGTTAGGATAATTTGAGATACTGTTACAGGTGACTTTTATTAATCTACCATGGCAACAATTAACGATAACTACCTC AAACTTAAAGCCGGATACTT
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Specific Protein Phosphatase; Secreted Phosphohydrolase; Phosphohydrolase; Phosphoesterase
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKFNRRYFLISLSSGLGLAFYSYNNLQQTPTTKLKKVNSKTTANAPVYSSEIPTPSAPATKGIFAPKRGEVRLVVISDLN SSYGSTTYQIQVEKTMTLIPELQPDLLLCAGDMIAGQKLSLTEENIEDMWSAFDRYIAKPLRQAKQPFCMTMGNHDASGY FKKSGDGYMYEKERIQAQIYWIKHKNDLNINFLEADGFPFYYSFIHQEIFYLIWDASTFDIPTKQLEWVKKSLASSQAQT AKMRIVMGHLPLYAVAVGKNKFGDVLTETEKLQNLLEKYNVHLYISGHHHAYFPGYKGNLKLLHTGALGSGPRVLLNSNL PPRNTLTVLDINLELNQSFYTTYDLKTMRVVHLQELPEKITGLNGWVLREPKVMLPN
Sequences:
>Translated_377_residues MKFNRRYFLISLSSGLGLAFYSYNNLQQTPTTKLKKVNSKTTANAPVYSSEIPTPSAPATKGIFAPKRGEVRLVVISDLN SSYGSTTYQIQVEKTMTLIPELQPDLLLCAGDMIAGQKLSLTEENIEDMWSAFDRYIAKPLRQAKQPFCMTMGNHDASGY FKKSGDGYMYEKERIQAQIYWIKHKNDLNINFLEADGFPFYYSFIHQEIFYLIWDASTFDIPTKQLEWVKKSLASSQAQT AKMRIVMGHLPLYAVAVGKNKFGDVLTETEKLQNLLEKYNVHLYISGHHHAYFPGYKGNLKLLHTGALGSGPRVLLNSNL PPRNTLTVLDINLELNQSFYTTYDLKTMRVVHLQELPEKITGLNGWVLREPKVMLPN >Mature_377_residues MKFNRRYFLISLSSGLGLAFYSYNNLQQTPTTKLKKVNSKTTANAPVYSSEIPTPSAPATKGIFAPKRGEVRLVVISDLN SSYGSTTYQIQVEKTMTLIPELQPDLLLCAGDMIAGQKLSLTEENIEDMWSAFDRYIAKPLRQAKQPFCMTMGNHDASGY FKKSGDGYMYEKERIQAQIYWIKHKNDLNINFLEADGFPFYYSFIHQEIFYLIWDASTFDIPTKQLEWVKKSLASSQAQT AKMRIVMGHLPLYAVAVGKNKFGDVLTETEKLQNLLEKYNVHLYISGHHHAYFPGYKGNLKLLHTGALGSGPRVLLNSNL PPRNTLTVLDINLELNQSFYTTYDLKTMRVVHLQELPEKITGLNGWVLREPKVMLPN
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42872; Mature: 42872
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNRRYFLISLSSGLGLAFYSYNNLQQTPTTKLKKVNSKTTANAPVYSSEIPTPSAPAT CCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCCC KGIFAPKRGEVRLVVISDLNSSYGSTTYQIQVEKTMTLIPELQPDLLLCAGDMIAGQKLS CCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCEEE LTEENIEDMWSAFDRYIAKPLRQAKQPFCMTMGNHDASGYFKKSGDGYMYEKERIQAQIY CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCEEECCEEEEEEE WIKHKNDLNINFLEADGFPFYYSFIHQEIFYLIWDASTFDIPTKQLEWVKKSLASSQAQT EEEECCCCEEEEEECCCCCHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHH AKMRIVMGHLPLYAVAVGKNKFGDVLTETEKLQNLLEKYNVHLYISGHHHAYFPGYKGNL EEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCE KLLHTGALGSGPRVLLNSNLPPRNTLTVLDINLELNQSFYTTYDLKTMRVVHLQELPEKI EEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCEEEEECCEEEEEHHHHHHHHHH TGLNGWVLREPKVMLPN CCCCCEEEECCEEECCC >Mature Secondary Structure MKFNRRYFLISLSSGLGLAFYSYNNLQQTPTTKLKKVNSKTTANAPVYSSEIPTPSAPAT CCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCCC KGIFAPKRGEVRLVVISDLNSSYGSTTYQIQVEKTMTLIPELQPDLLLCAGDMIAGQKLS CCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCEEE LTEENIEDMWSAFDRYIAKPLRQAKQPFCMTMGNHDASGYFKKSGDGYMYEKERIQAQIY CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCEEECCEEEEEEE WIKHKNDLNINFLEADGFPFYYSFIHQEIFYLIWDASTFDIPTKQLEWVKKSLASSQAQT EEEECCCCEEEEEECCCCCHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHH AKMRIVMGHLPLYAVAVGKNKFGDVLTETEKLQNLLEKYNVHLYISGHHHAYFPGYKGNL EEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCE KLLHTGALGSGPRVLLNSNLPPRNTLTVLDINLELNQSFYTTYDLKTMRVVHLQELPEKI EEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCEEEEECCEEEEEHHHHHHHHHH TGLNGWVLREPKVMLPN CCCCCEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA