Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476815

Identifier: 113476815

GI number: 113476815

Start: 5053846

End: 5054205

Strand: Reverse

Name: 113476815

Synonym: Tery_3295

Alternate gene names: NA

Gene position: 5054205-5053846 (Counterclockwise)

Preceding gene: 113476816

Following gene: 113476814

Centisome position: 65.21

GC content: 31.94

Gene sequence:

>360_bases
ATGAGTAGTATCCTTCCCGTAATTTTTGTATGGTTTATTTCAGTTTTTTGTGCTTGTTTAGGTGTTATTATTGGAGGTAC
TACTGGAGGAGTAGTTGGTGCAATTACTGGCTTAATTACCAAATCTAGGTGTACAATGAGAGTATTTAATGTAGCTACTT
TCACTTCACTTTTAATGACAGTTATTTTTTTTATTGTAGCTCGTGAAAAAATTCAACCTCTCAATTGTGATGATGGCTTA
GAGGAAGTTTATATTTGTTTAAGTCCGTTATTTATTCCTCTTTGGGGAGCTATATTTGGAGGTATATTTGGCTCATTTAT
CGGAGTATTGTTTGAAATAAACAGAAAAAAAAGTCATTAA

Upstream 100 bases:

>100_bases
CAAGCATCTTGCTCGCAGCTCATTTTACCTCACCCTTAATGAATTTCTCTATTCCCCAATCTCCCCATTAATATCTAGTA
AAAAAGATCAGGATAATTTT

Downstream 100 bases:

>100_bases
ATTGGAGTTGCTGAAGTATAGGTATAATTTTTGTGTTTCCTATCCTAATTCTCTAGTTCCTAAAACCGTTAATACTGAAC
TAAAAAACAAGTTAATGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSSILPVIFVWFISVFCACLGVIIGGTTGGVVGAITGLITKSRCTMRVFNVATFTSLLMTVIFFIVAREKIQPLNCDDGL
EEVYICLSPLFIPLWGAIFGGIFGSFIGVLFEINRKKSH

Sequences:

>Translated_119_residues
MSSILPVIFVWFISVFCACLGVIIGGTTGGVVGAITGLITKSRCTMRVFNVATFTSLLMTVIFFIVAREKIQPLNCDDGL
EEVYICLSPLFIPLWGAIFGGIFGSFIGVLFEINRKKSH
>Mature_118_residues
SSILPVIFVWFISVFCACLGVIIGGTTGGVVGAITGLITKSRCTMRVFNVATFTSLLMTVIFFIVAREKIQPLNCDDGLE
EVYICLSPLFIPLWGAIFGGIFGSFIGVLFEINRKKSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12957; Mature: 12826

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILPVIFVWFISVFCACLGVIIGGTTGGVVGAITGLITKSRCTMRVFNVATFTSLLMT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFFIVAREKIQPLNCDDGLEEVYICLSPLFIPLWGAIFGGIFGSFIGVLFEINRKKSH
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSILPVIFVWFISVFCACLGVIIGGTTGGVVGAITGLITKSRCTMRVFNVATFTSLLMT
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFFIVAREKIQPLNCDDGLEEVYICLSPLFIPLWGAIFGGIFGSFIGVLFEINRKKSH
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA