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The map label for this gene is patA [H]

Identifier: 113476775

GI number: 113476775

Start: 4982580

End: 4983797

Strand: Reverse

Name: patA [H]

Synonym: Tery_3249

Alternate gene names: 113476775

Gene position: 4983797-4982580 (Counterclockwise)

Preceding gene: 113476777

Following gene: 113476774

Centisome position: 64.31

GC content: 36.7

Gene sequence:

>1218_bases
ATGCAGGGAAATTTAAATGAAATTGATATCCGCAGCATCCTGCAACTTATAGACTTAGGTCAGCGAACTGGTGAACTTTT
TGTTAAGGCTTATAGCTCACCAGTTAGTAGTAATATTGCTGAACCCGAAAAGCACTTTCCCAAAGAAGCATCTTGGTTTG
TATTTTTTCTCAGTGGTCAGATTATCTACGCTACCCCAAGTGCAGGTAGTTTATTTCGTTTGAAAGACTATTTACATCGC
TACAAAGCAGATAGATATCTTGATACAATTAAGGTTCCTTCTGTTGCATCTGTCAATGCTCCCGAGTATGGATACTTATG
GGCTTTGCTAGAAAAGGGTCTGCTCACGCCAGCCCAGGGACGTAGTATCATTAATAATATGGTGTATGAAACTCTATTTG
ACTTACTAAGTCTTCGCCGAGGAGCATTTATTTTTGAGCTTGGGCCAGCACTCACACCTCAGCTAACCACTTTAGAAGTT
AGGTCATTGTTGGCAAAAATTATGAAACAAATACAGGAATGGAATCAGTTTTCTCCTTATATTCAATCTGTTGAACAGTG
TCCAGTAATTTCAGTTCCAGCCCAGTTAAAGAAAGCATTAAAACCGAGAATATATAATATTTTAAGTCATTGGTCAGATG
GCCAGACATCTATACAACAAATAGCTAGATATCTAAACAGAGATGTATTAACAGTAGCCAAGGCCATTTATCCTTTCGTA
CAAAAAGGTATAGTGCAACTGCTAGATCAATCTTCAGAAACAAGCATGATTAAGAAATCAAAGCCATTAGAACGAGAAAC
CAAAATTTGTAAAGTAGTATGTATTGATGATGATTTAGTGATTCGGGAAACAGTTAAATCAATCTTAAATCAACATGGTT
ATGAAGCTAGTAGTCTGAGCGATCCCCTCAAGGCGTTGGGAGAAGTATTTTATATTAAGCCAGACTTAATTTTATGTGAT
ATTGCTATGCCCGAACTAAGTGGTTATGAGATTTGCGCAATGTTGCGTAACTCTACAGCATTTCACCAAACACCTATCAT
TATGCTAACTGGTATAGAAGGATTTATTGATCGGGTTAAGGCCAGAATAGTTGGAGCTACACACTATTTGACTAAACCTT
TCGGAGAAAATGAATTACTAATGTTAGTAGAAAAGTATATTGGACCAGGATTAGTAGAAGGTCCTGATAATAACAGAATT
TACTCAAAAAATAAATAG

Upstream 100 bases:

>100_bases
CTCACTTTTAACTGTACATCAGACATTAGCTATAATTGCCATGTCTCAAATTGCAAATTTTTTCTCATAAAGATTATATT
TTTTATATTTTACAAGCTGC

Downstream 100 bases:

>100_bases
GGTTGGATTAATAAAACCTATTAGTAAGTGCAGGGAATGGGAAATGGCCAATAGTTACAGTATATTAATTTTTCGGCATT
TTTCTCACTCTGGTTAGGGA

Product: response regulator receiver protein

Products: NA

Alternate protein names: PAT-1 [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MQGNLNEIDIRSILQLIDLGQRTGELFVKAYSSPVSSNIAEPEKHFPKEASWFVFFLSGQIIYATPSAGSLFRLKDYLHR
YKADRYLDTIKVPSVASVNAPEYGYLWALLEKGLLTPAQGRSIINNMVYETLFDLLSLRRGAFIFELGPALTPQLTTLEV
RSLLAKIMKQIQEWNQFSPYIQSVEQCPVISVPAQLKKALKPRIYNILSHWSDGQTSIQQIARYLNRDVLTVAKAIYPFV
QKGIVQLLDQSSETSMIKKSKPLERETKICKVVCIDDDLVIRETVKSILNQHGYEASSLSDPLKALGEVFYIKPDLILCD
IAMPELSGYEICAMLRNSTAFHQTPIIMLTGIEGFIDRVKARIVGATHYLTKPFGENELLMLVEKYIGPGLVEGPDNNRI
YSKNK

Sequences:

>Translated_405_residues
MQGNLNEIDIRSILQLIDLGQRTGELFVKAYSSPVSSNIAEPEKHFPKEASWFVFFLSGQIIYATPSAGSLFRLKDYLHR
YKADRYLDTIKVPSVASVNAPEYGYLWALLEKGLLTPAQGRSIINNMVYETLFDLLSLRRGAFIFELGPALTPQLTTLEV
RSLLAKIMKQIQEWNQFSPYIQSVEQCPVISVPAQLKKALKPRIYNILSHWSDGQTSIQQIARYLNRDVLTVAKAIYPFV
QKGIVQLLDQSSETSMIKKSKPLERETKICKVVCIDDDLVIRETVKSILNQHGYEASSLSDPLKALGEVFYIKPDLILCD
IAMPELSGYEICAMLRNSTAFHQTPIIMLTGIEGFIDRVKARIVGATHYLTKPFGENELLMLVEKYIGPGLVEGPDNNRI
YSKNK
>Mature_405_residues
MQGNLNEIDIRSILQLIDLGQRTGELFVKAYSSPVSSNIAEPEKHFPKEASWFVFFLSGQIIYATPSAGSLFRLKDYLHR
YKADRYLDTIKVPSVASVNAPEYGYLWALLEKGLLTPAQGRSIINNMVYETLFDLLSLRRGAFIFELGPALTPQLTTLEV
RSLLAKIMKQIQEWNQFSPYIQSVEQCPVISVPAQLKKALKPRIYNILSHWSDGQTSIQQIARYLNRDVLTVAKAIYPFV
QKGIVQLLDQSSETSMIKKSKPLERETKICKVVCIDDDLVIRETVKSILNQHGYEASSLSDPLKALGEVFYIKPDLILCD
IAMPELSGYEICAMLRNSTAFHQTPIIMLTGIEGFIDRVKARIVGATHYLTKPFGENELLMLVEKYIGPGLVEGPDNNRI
YSKNK

Specific function: Controls heterocyst pattern formation. Required for the differentiation of intercalary heterocysts but not for terminal heterocysts [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=126, Percent_Identity=31.7460317460317, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790860, Length=138, Percent_Identity=29.7101449275362, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 45713; Mature: 45713

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNLNEIDIRSILQLIDLGQRTGELFVKAYSSPVSSNIAEPEKHFPKEASWFVFFLSGQ
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCHHHCCCCCCEEEEEEECE
IIYATPSAGSLFRLKDYLHRYKADRYLDTIKVPSVASVNAPEYGYLWALLEKGLLTPAQG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
RSIINNMVYETLFDLLSLRRGAFIFELGPALTPQLTTLEVRSLLAKIMKQIQEWNQFSPY
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
IQSVEQCPVISVPAQLKKALKPRIYNILSHWSDGQTSIQQIARYLNRDVLTVAKAIYPFV
HHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
QKGIVQLLDQSSETSMIKKSKPLERETKICKVVCIDDDLVIRETVKSILNQHGYEASSLS
HHHHHHHHCCCCHHHHHHHCCCCCHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHH
DPLKALGEVFYIKPDLILCDIAMPELSGYEICAMLRNSTAFHQTPIIMLTGIEGFIDRVK
HHHHHHHHEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCHHCCCEEEEECCHHHHHHHH
ARIVGATHYLTKPFGENELLMLVEKYIGPGLVEGPDNNRIYSKNK
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGNLNEIDIRSILQLIDLGQRTGELFVKAYSSPVSSNIAEPEKHFPKEASWFVFFLSGQ
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCHHHCCCCCCEEEEEEECE
IIYATPSAGSLFRLKDYLHRYKADRYLDTIKVPSVASVNAPEYGYLWALLEKGLLTPAQG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
RSIINNMVYETLFDLLSLRRGAFIFELGPALTPQLTTLEVRSLLAKIMKQIQEWNQFSPY
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
IQSVEQCPVISVPAQLKKALKPRIYNILSHWSDGQTSIQQIARYLNRDVLTVAKAIYPFV
HHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
QKGIVQLLDQSSETSMIKKSKPLERETKICKVVCIDDDLVIRETVKSILNQHGYEASSLS
HHHHHHHHCCCCHHHHHHHCCCCCHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHH
DPLKALGEVFYIKPDLILCDIAMPELSGYEICAMLRNSTAFHQTPIIMLTGIEGFIDRVK
HHHHHHHHEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCHHCCCEEEEECCHHHHHHHH
ARIVGATHYLTKPFGENELLMLVEKYIGPGLVEGPDNNRIYSKNK
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1608976; 11237320; 11759840 [H]