| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476141
Identifier: 113476141
GI number: 113476141
Start: 3891979
End: 3893157
Strand: Direct
Name: 113476141
Synonym: Tery_2524
Alternate gene names: NA
Gene position: 3891979-3893157 (Clockwise)
Preceding gene: 113476136
Following gene: 113476142
Centisome position: 50.22
GC content: 32.23
Gene sequence:
>1179_bases ATGAGTATTGAGAGCTTAGAAAAAAATCCTACAAAAAAGTCAGTTGCTGTCTTTTATCCCTTGTTTTCTGGTGGAGGTGC AGAAGCAGTTTGTCTTTGGATATTAGAAGCTTTAAAAGAAACATATGATCTGACACTATTTACTGTATTTGATGTAGATT TTGACAAACTCAATTCCATGTATGGAACTCAAATTTCCCAGGAAATGGTAAAGATTAGAGCAATCTTTCCTACAGTAACT AAAACTTTGTTAAGATTTTTATTTGCCAATAATAGAGATTTAGCAATCTTAGTAATGCATCTTCTACTGCGCCATCTGAA AGCTCATAATCAGGAATATGATTTATTATTATCAGGTTACAATGCTGTAGACTTTGGTCGTGTCGGAATTCAATATGTTC ATTGGATTAATGTGATTCCTAATGATGGATTGTATGGTAAAATTTCTAACTCTTCCTTGGAGAATGTCAAACTTAATATA TCAATTACAAATTCCTTTGCAGTATCTAAAGTTTTAAAAGATACATATGCTATTGATGCTAAAGTTGTGTATCCACCTGT TTTACTTAACGATCAAAATATATCTTGGGAACAAAAAGAAAATGCTTTTATTTGCAGCGGAAGATTGACAGAAGCTAAAG CTCCTCATAAAGCTATTCAAATCTTGAAAAAAGTTCGTCAAAAAGGATTTGATGTTAAGCTTTACATTACAGGAGGGGGA GCCGGAATATATGGGTGGAAATATAAACGAACATTAACAAAAATGGCCAATGAAAATAGTGAATGGGTAAAATTGTATGA AAATCTGCCTTATAAAGAATATGTTAACATTCTAGCCAAGTGTAGATATGGTATTCACTACAAATCAGAACCATTTGGCA TTTCAATAGCAGAAATGATGAAAGCAGGTGCAATACCTATTGTCAGAAATAAACGAGGACACTCAGCAGCAGGACAAGTG GAGATACTTGGAGAAGAAAATCAAGAGTTATTTTTTGAGAATCAAGATGAAGCAGTAGAAAAAATCACTAATATTCTCCA AAATTCAGAAATACAGGAAAAACTTCAAGCATCTCTACTTAAGAGAAAAGATATTTTTTCCACTGGTAGATTTATGACTG GTATTCGTCAGGTTGTAAAAAATTATTTTGAACAATATGATGCTTCTGTTATAAGTTAA
Upstream 100 bases:
>100_bases ACAGCTCAAATAAGATTGCTATAGTTAAAAATATTGACACAATACCGAAAAAAATGATACTTTATCAGCATATTATTAAG TAAGCATTATAATTAAACTA
Downstream 100 bases:
>100_bases ATATTTAAATTAGATTTTTGAAGCTCAAGTATTCTTAATAGTAGGTTTAAACTGTATAAATAAAACCGAAAAAATATAGC CTATAACAATTATTATAATA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSMYGTQISQEMVKIRAIFPTVT KTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGYNAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNI SITNSFAVSKVLKDTYAIDAKVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMMKAGAIPIVRNKRGHSAAGQV EILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLLKRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS
Sequences:
>Translated_392_residues MSIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSMYGTQISQEMVKIRAIFPTVT KTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGYNAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNI SITNSFAVSKVLKDTYAIDAKVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMMKAGAIPIVRNKRGHSAAGQV EILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLLKRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS >Mature_391_residues SIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSMYGTQISQEMVKIRAIFPTVTK TLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGYNAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNIS ITNSFAVSKVLKDTYAIDAKVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGGA GIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMMKAGAIPIVRNKRGHSAAGQVE ILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLLKRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44556; Mature: 44425
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSM CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEECCHHHHHHH YGTQISQEMVKIRAIFPTVTKTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC NAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNISITNSFAVSKVLKDTYAIDA CCCCHHHHHHEEEEEEEECCCCCCEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHHCCE KVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG EEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMM CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH KAGAIPIVRNKRGHSAAGQVEILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLL HCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH KRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSM CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEECCHHHHHHH YGTQISQEMVKIRAIFPTVTKTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC NAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNISITNSFAVSKVLKDTYAIDA CCCCHHHHHHEEEEEEEECCCCCCEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHHCCE KVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG EEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMM CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH KAGAIPIVRNKRGHSAAGQVEILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLL HCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH KRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA