| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476136
Identifier: 113476136
GI number: 113476136
Start: 3885105
End: 3885875
Strand: Direct
Name: 113476136
Synonym: Tery_2518
Alternate gene names: NA
Gene position: 3885105-3885875 (Clockwise)
Preceding gene: 113476135
Following gene: 113476141
Centisome position: 50.13
GC content: 36.45
Gene sequence:
>771_bases TTGAGACACATAAAAAATAAATACACCAAACAATTACAAAAAGCTATTTCCCCCCAGTCTTTAGAGATAAATTGGATTAA GAAAGAAGATAGCTGGCTTTTAGATAACTTCAAAGGACCAATTGTCCCCATTCCCAAAGCTTTGATGAGGGAAAAAATAG AAGAATTAGCACATCTTGCTAACCAACTCGGTCCTAAACCGCTTTGGGAAGGATATGAAAATCTGCAAAATTACCCCAGG GATGTGAAAGAAGCAACTCGTACAGCAAATCAAGTGCGAACTCAAGCCAAAGTAGGTGATTTTTATGCTCACCTGGTGCA AAAAAGAAAACCTTCCGTTGTGGTAGAATTTGGTACGGCATTTGGTGTTTCAGGAATGTATTGGCTTTCAGGATTAGAAG GTAATAATTTTGGAGAATTACTGAGTTTCGATCCTAATGAGGTTTGGGCAGAAATTGCTAGGAAAAACTTATCTGGAATT AGCAATAGATTTCAGTTAGTTAATGGAACTTTTGAAGATAATATAGATGCTTATCTGGGGAGCGATCGCCAAATAGATAT GGCGTTTATTGACGCGATACATACCAGTGAATTTGTTTTTTCGCAGTTTGAAATTGTTGTTGCTAGGCTAGCTCCTAATG GAATTGTTTTATTAGATGATATTTATTTTTCCGAAGATATGAAGTATGCTTGGAAAACTATTGCACTTAGCGATCGTGTT AAAGCTAGTGCTGCTATTGAAAGAGTTGGTATTGTTGAACTTAAAGGATAA
Upstream 100 bases:
>100_bases GAGGCAAGAGTGGGAGTGGATGAAGTCGTTATAAACTCAAGAAAATGAATATTTTTAAATCAGTTGTTAAGACAATTATT CCTGAAAAAAACGTGACTCT
Downstream 100 bases:
>100_bases TAATAATTGAGGATGGAGTTAGAAAAAATTTCTCTCTCCAATACAAAATTACTATTTATAGTTGTTTTAATTAAGAATAA AACAATTATTCCCCTGAAAG
Product: O-methyltransferase-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRHIKNKYTKQLQKAISPQSLEINWIKKEDSWLLDNFKGPIVPIPKALMREKIEELAHLANQLGPKPLWEGYENLQNYPR DVKEATRTANQVRTQAKVGDFYAHLVQKRKPSVVVEFGTAFGVSGMYWLSGLEGNNFGELLSFDPNEVWAEIARKNLSGI SNRFQLVNGTFEDNIDAYLGSDRQIDMAFIDAIHTSEFVFSQFEIVVARLAPNGIVLLDDIYFSEDMKYAWKTIALSDRV KASAAIERVGIVELKG
Sequences:
>Translated_256_residues MRHIKNKYTKQLQKAISPQSLEINWIKKEDSWLLDNFKGPIVPIPKALMREKIEELAHLANQLGPKPLWEGYENLQNYPR DVKEATRTANQVRTQAKVGDFYAHLVQKRKPSVVVEFGTAFGVSGMYWLSGLEGNNFGELLSFDPNEVWAEIARKNLSGI SNRFQLVNGTFEDNIDAYLGSDRQIDMAFIDAIHTSEFVFSQFEIVVARLAPNGIVLLDDIYFSEDMKYAWKTIALSDRV KASAAIERVGIVELKG >Mature_256_residues MRHIKNKYTKQLQKAISPQSLEINWIKKEDSWLLDNFKGPIVPIPKALMREKIEELAHLANQLGPKPLWEGYENLQNYPR DVKEATRTANQVRTQAKVGDFYAHLVQKRKPSVVVEFGTAFGVSGMYWLSGLEGNNFGELLSFDPNEVWAEIARKNLSGI SNRFQLVNGTFEDNIDAYLGSDRQIDMAFIDAIHTSEFVFSQFEIVVARLAPNGIVLLDDIYFSEDMKYAWKTIALSDRV KASAAIERVGIVELKG
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29083; Mature: 29083
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHIKNKYTKQLQKAISPQSLEINWIKKEDSWLLDNFKGPIVPIPKALMREKIEELAHLA CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH NQLGPKPLWEGYENLQNYPRDVKEATRTANQVRTQAKVGDFYAHLVQKRKPSVVVEFGTA HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCH FGVSGMYWLSGLEGNNFGELLSFDPNEVWAEIARKNLSGISNRFQLVNGTFEDNIDAYLG HCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCC SDRQIDMAFIDAIHTSEFVFSQFEIVVARLAPNGIVLLDDIYFSEDMKYAWKTIALSDRV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHH KASAAIERVGIVELKG HHHHHHHHCCEEEECC >Mature Secondary Structure MRHIKNKYTKQLQKAISPQSLEINWIKKEDSWLLDNFKGPIVPIPKALMREKIEELAHLA CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH NQLGPKPLWEGYENLQNYPRDVKEATRTANQVRTQAKVGDFYAHLVQKRKPSVVVEFGTA HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCH FGVSGMYWLSGLEGNNFGELLSFDPNEVWAEIARKNLSGISNRFQLVNGTFEDNIDAYLG HCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCC SDRQIDMAFIDAIHTSEFVFSQFEIVVARLAPNGIVLLDDIYFSEDMKYAWKTIALSDRV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHH KASAAIERVGIVELKG HHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA