Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yfjP [C]

Identifier: 113476012

GI number: 113476012

Start: 3676730

End: 3678637

Strand: Direct

Name: yfjP [C]

Synonym: Tery_2380

Alternate gene names: 113476012

Gene position: 3676730-3678637 (Clockwise)

Preceding gene: 113476011

Following gene: 113476014

Centisome position: 47.44

GC content: 39.52

Gene sequence:

>1908_bases
ATGGTAAAATTAAAAAAGTGGCACTTAGCAATACTCGCTATTCCCCCTCTTGCTGTAGTAGCCTTCCTAATGATATCCGC
TGGCAGACAAATAAATAATTGGGGTATTAACTGGGTCTGGGGAATATTCATCCTTATTTTTGTCGGCTGGCGTAGGTTGC
TAGTCAAATGGACTCGACCTACAGTTGCACAAATGGAAGAAGTAATAGCAGAAGTTAACAAAGAAATTCCCGCCATAGAC
AACACGAGAAACCAACCTTTAGAAAACGAAGCCACTAAACAACTAGAGATCACTCTCCAAGAAATTATCAAATCATGCCG
TAACGACCCTCCATTCTGGGAAGACTGGCAAATATTCTGGCAACGTTGTCAAGAAGTGGTGGCTGCTGTTGCTCATGCTT
ACTATCCCGAAGTCAAATATCCTCTACTTAATATTTATATCCCTCAAGCTTACAGTTTAATTCGAGGTACTGTTGATGAC
ATAGACAGATGGATACAAAAATTATCCCCTACCCTGAATCAAATAACTGTTGGTCAAGCATATCAGGGATATGAAATTTA
TCGGAAGTTAGAACCCTCAGCTCGAAAACTTTTCCAAGTTTTGGGTTGGGCGCAATGGTTACTTAACCCTGTAGCAGCAG
CCGCTAAAGTCGCAAGTCGCGGTTACAATGAACGAGCAAATCAGCAATTGTTGGCTAATTTGAGTCAAATATTGCGGGAA
GTGGCGTTGCGAAATTTGTCTCAACAGGCGATCGCTATTTATGGAGGTAGTAAGTTAGAATTTTTAGACTCTGCTATTTC
TACTCAGACTCTCCCGAAAGCAGAAACTAAAACTCTCGAACAAATTCTGGCACAAGCTCAACCGACGGAAACTGTTGAGC
AAAAACCTGTTAATATTTTATTGGTGGGGCGTACGGGAGCAGGAAAAAGTAGTTTAATTAATACTCTATTTGCTGCAGAG
CGTGCTGAGGTCGATGTGTTGCCAAGCACGGATGAAATTAAAAATTATCAGTGGCAAACTCAAATGGGAGAAATTCTTAA
CCTTTGGGATACTCCTGGTTATGAACAAGTTAACCGTGCCGACCTGCGAGAATTGGTGCTTGACTATGCTAAAACTGTTG
ATTTATTGTTGTTAGTTAACCCTGCTCTTGACCCTGCCTTGCAAATGGATATAGATTTTCTCCAAGATCTCAAAGGAGAA
GTTGCTAATTTGCCTACTATTATAATTATAACCCAAGTCGACCGTTTACGACCGATACGGGAATGGCAACCACCTTATGA
TTGGATCTGGGGCAAAAATGCTAAGGAAAAATCTATTCGGGAGGCGACTCAATATCGGGCAGAAATTTTGGGAGATTTTT
GTAGTCAAGTTTTACCTGTTGTAACGGCGGATATTAAAAATAATAGAAATGGTTGGAATGTTGATGCCATATCTTTGTCA
CTCTTAGAAGCTATTGCTCCTGCTAAACAACTACGTCTAGCTAAGTTTTTGTGCGATCGCAAAGCTCGTTCTGTAGCAGC
AGCTCAAATTATTAACCATTATACTTTTCAAATGGCTACTACTCAAGGATTAACTGCTTTATTGAAAAGCCCAGTATTGC
AGTTTATTTCTACTTTAACAACAGGTTCACCAGCTTTAGCTTATGTGCTAGCAGAAAAAATTCCTGTGGAAGATTTGCCT
ATAGTTATTGGTAAATTACAGATGGCTTATGATTTATTTTCCTTATTGAGTGAGGATACAAATTTGGGCAGTTTTGATCT
GTTAGCATTGTGGCCTTTATTATTAGAAAATCCTGCTGCACCAGACCTTAATGCTTGGGCATTTGGTCACGCTTTGGTAG
AATATTGGATGCAGGATTTGAGTATTATACAATTGCAACAGCGGTTTAATAATTATTTAAAAATCTAA

Upstream 100 bases:

>100_bases
TCAATAGACATCTACAAAAATGCTGGTTTTGTTACGTCAGCGTAAGGGCTTGAAAACCTTTCCTAGAGATGTCTAATATA
CAAACTTAATACATCTCACT

Downstream 100 bases:

>100_bases
TTATTCTCTAACTAAGAGGCTGTTTGAGAAGTACCACGAGGGGTTGATTAATCCTTTTGACAAACACCTCTTCCCTAACC
TCCCACCACAACGGTTTGGG

Product: HSR1-related GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MVKLKKWHLAILAIPPLAVVAFLMISAGRQINNWGINWVWGIFILIFVGWRRLLVKWTRPTVAQMEEVIAEVNKEIPAID
NTRNQPLENEATKQLEITLQEIIKSCRNDPPFWEDWQIFWQRCQEVVAAVAHAYYPEVKYPLLNIYIPQAYSLIRGTVDD
IDRWIQKLSPTLNQITVGQAYQGYEIYRKLEPSARKLFQVLGWAQWLLNPVAAAAKVASRGYNERANQQLLANLSQILRE
VALRNLSQQAIAIYGGSKLEFLDSAISTQTLPKAETKTLEQILAQAQPTETVEQKPVNILLVGRTGAGKSSLINTLFAAE
RAEVDVLPSTDEIKNYQWQTQMGEILNLWDTPGYEQVNRADLRELVLDYAKTVDLLLLVNPALDPALQMDIDFLQDLKGE
VANLPTIIIITQVDRLRPIREWQPPYDWIWGKNAKEKSIREATQYRAEILGDFCSQVLPVVTADIKNNRNGWNVDAISLS
LLEAIAPAKQLRLAKFLCDRKARSVAAAQIINHYTFQMATTQGLTALLKSPVLQFISTLTTGSPALAYVLAEKIPVEDLP
IVIGKLQMAYDLFSLLSEDTNLGSFDLLALWPLLLENPAAPDLNAWAFGHALVEYWMQDLSIIQLQQRFNNYLKI

Sequences:

>Translated_635_residues
MVKLKKWHLAILAIPPLAVVAFLMISAGRQINNWGINWVWGIFILIFVGWRRLLVKWTRPTVAQMEEVIAEVNKEIPAID
NTRNQPLENEATKQLEITLQEIIKSCRNDPPFWEDWQIFWQRCQEVVAAVAHAYYPEVKYPLLNIYIPQAYSLIRGTVDD
IDRWIQKLSPTLNQITVGQAYQGYEIYRKLEPSARKLFQVLGWAQWLLNPVAAAAKVASRGYNERANQQLLANLSQILRE
VALRNLSQQAIAIYGGSKLEFLDSAISTQTLPKAETKTLEQILAQAQPTETVEQKPVNILLVGRTGAGKSSLINTLFAAE
RAEVDVLPSTDEIKNYQWQTQMGEILNLWDTPGYEQVNRADLRELVLDYAKTVDLLLLVNPALDPALQMDIDFLQDLKGE
VANLPTIIIITQVDRLRPIREWQPPYDWIWGKNAKEKSIREATQYRAEILGDFCSQVLPVVTADIKNNRNGWNVDAISLS
LLEAIAPAKQLRLAKFLCDRKARSVAAAQIINHYTFQMATTQGLTALLKSPVLQFISTLTTGSPALAYVLAEKIPVEDLP
IVIGKLQMAYDLFSLLSEDTNLGSFDLLALWPLLLENPAAPDLNAWAFGHALVEYWMQDLSIIQLQQRFNNYLKI
>Mature_635_residues
MVKLKKWHLAILAIPPLAVVAFLMISAGRQINNWGINWVWGIFILIFVGWRRLLVKWTRPTVAQMEEVIAEVNKEIPAID
NTRNQPLENEATKQLEITLQEIIKSCRNDPPFWEDWQIFWQRCQEVVAAVAHAYYPEVKYPLLNIYIPQAYSLIRGTVDD
IDRWIQKLSPTLNQITVGQAYQGYEIYRKLEPSARKLFQVLGWAQWLLNPVAAAAKVASRGYNERANQQLLANLSQILRE
VALRNLSQQAIAIYGGSKLEFLDSAISTQTLPKAETKTLEQILAQAQPTETVEQKPVNILLVGRTGAGKSSLINTLFAAE
RAEVDVLPSTDEIKNYQWQTQMGEILNLWDTPGYEQVNRADLRELVLDYAKTVDLLLLVNPALDPALQMDIDFLQDLKGE
VANLPTIIIITQVDRLRPIREWQPPYDWIWGKNAKEKSIREATQYRAEILGDFCSQVLPVVTADIKNNRNGWNVDAISLS
LLEAIAPAKQLRLAKFLCDRKARSVAAAQIINHYTFQMATTQGLTALLKSPVLQFISTLTTGSPALAYVLAEKIPVEDLP
IVIGKLQMAYDLFSLLSEDTNLGSFDLLALWPLLLENPAAPDLNAWAFGHALVEYWMQDLSIIQLQQRFNNYLKI

Specific function: Unknown

COG id: COG3596

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71960; Mature: 71960

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLKKWHLAILAIPPLAVVAFLMISAGRQINNWGINWVWGIFILIFVGWRRLLVKWTRP
CCEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TVAQMEEVIAEVNKEIPAIDNTRNQPLENEATKQLEITLQEIIKSCRNDPPFWEDWQIFW
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
QRCQEVVAAVAHAYYPEVKYPLLNIYIPQAYSLIRGTVDDIDRWIQKLSPTLNQITVGQA
HHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCHHHHEECCCC
YQGYEIYRKLEPSARKLFQVLGWAQWLLNPVAAAAKVASRGYNERANQQLLANLSQILRE
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VALRNLSQQAIAIYGGSKLEFLDSAISTQTLPKAETKTLEQILAQAQPTETVEQKPVNIL
HHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEE
LVGRTGAGKSSLINTLFAAERAEVDVLPSTDEIKNYQWQTQMGEILNLWDTPGYEQVNRA
EEECCCCCHHHHHHHHHHHHHCCEECCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
DLRELVLDYAKTVDLLLLVNPALDPALQMDIDFLQDLKGEVANLPTIIIITQVDRLRPIR
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCHH
EWQPPYDWIWGKNAKEKSIREATQYRAEILGDFCSQVLPVVTADIKNNRNGWNVDAISLS
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LLEAIAPAKQLRLAKFLCDRKARSVAAAQIINHYTFQMATTQGLTALLKSPVLQFISTLT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGSPALAYVLAEKIPVEDLPIVIGKLQMAYDLFSLLSEDTNLGSFDLLALWPLLLENPAA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
PDLNAWAFGHALVEYWMQDLSIIQLQQRFNNYLKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKLKKWHLAILAIPPLAVVAFLMISAGRQINNWGINWVWGIFILIFVGWRRLLVKWTRP
CCEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TVAQMEEVIAEVNKEIPAIDNTRNQPLENEATKQLEITLQEIIKSCRNDPPFWEDWQIFW
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
QRCQEVVAAVAHAYYPEVKYPLLNIYIPQAYSLIRGTVDDIDRWIQKLSPTLNQITVGQA
HHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCHHHHEECCCC
YQGYEIYRKLEPSARKLFQVLGWAQWLLNPVAAAAKVASRGYNERANQQLLANLSQILRE
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VALRNLSQQAIAIYGGSKLEFLDSAISTQTLPKAETKTLEQILAQAQPTETVEQKPVNIL
HHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEE
LVGRTGAGKSSLINTLFAAERAEVDVLPSTDEIKNYQWQTQMGEILNLWDTPGYEQVNRA
EEECCCCCHHHHHHHHHHHHHCCEECCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
DLRELVLDYAKTVDLLLLVNPALDPALQMDIDFLQDLKGEVANLPTIIIITQVDRLRPIR
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCHH
EWQPPYDWIWGKNAKEKSIREATQYRAEILGDFCSQVLPVVTADIKNNRNGWNVDAISLS
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LLEAIAPAKQLRLAKFLCDRKARSVAAAQIINHYTFQMATTQGLTALLKSPVLQFISTLT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGSPALAYVLAEKIPVEDLPIVIGKLQMAYDLFSLLSEDTNLGSFDLLALWPLLLENPAA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
PDLNAWAFGHALVEYWMQDLSIIQLQQRFNNYLKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA