Click here to switch to the map view.

The map label for this gene is 113476014

Identifier: 113476014

GI number: 113476014

Start: 3679663

End: 3680367

Strand: Direct

Name: 113476014

Synonym: Tery_2382

Alternate gene names: NA

Gene position: 3679663-3680367 (Clockwise)

Preceding gene: 113476012

Following gene: 113476016

Centisome position: 47.48

GC content: 39.29

Gene sequence:

>705_bases
TTGCTAGTATATGTAAAGAAAGGTAAACAAAATTCCCAAATTATTATGGAAATTAAACAAATTCAGGTATACTTGAAAAG
TTCTGATTCTCAAGAAAGATTGAAAGCACTGACTGAGTTAAGGAACTACGAGAGTGAAATTGTAGTTCCCCTGCTAAAAA
CCAGACAACAAGACCCAGAATTTCTAGTCCGTTCATTTGTGGCAATGGGGTTAGGGAATAAACGTACTCCTGAAGGTTTT
AAAATATTGCTAGAAATGATGCAAAATGACCCAGACTACAACGTGCGAGCGGAAGCAGCAAATTCTCTATCTAAGTTTGG
AGCCCAAGCAATTCCTTTTTTAGTAGAAAAATTTCGCCAAGACAATAATTGGTTGATGCGTCGGAGCATTCTGGCACCTC
TGATAGATATGCCATTTCCTGAAGCACTATACGAAGTGTGTATGTGCGCGATCGCTGATGAAGATACAACAGTGCAGGAA
GTTGCCATTAGTGCTTTAGGTAAGTTAGCAGGGACAAAGAAGGAAACTGAGGCTTTGCAAAAACTATTAGCTTTTGTCAG
TGCCGAATCTTGGAATATCCGGTTACGAGCTGCTCAAGGGTTAGGGAAATTTGACGTTCCTCAAGCAAAAGCAGCTTTGA
ATTATCTTAGCAAAGATGACAATTATAAAGTAGTAGCAGCTGCTTTAGAGAGCTCGCTATCATAA

Upstream 100 bases:

>100_bases
GTTGGTACTGAAGTATTAGCTTTTAAAGTTTCAGACATAATAATTTTCTCATTAATTTTGGTATTTTTCTACAATTTATC
ATCCTAGATTTAGGGATTAG

Downstream 100 bases:

>100_bases
AAATTATAGCATAGTACTATGCACAAGTCAAAAGTTAAAAGTAATCTCTAACTGAGTTGGAATATTTATAAACGTCCCCA
CCATATTTGGGTAATGCTGT

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein; Heat Domain-Containing Protein; CotB Mutant; HEAT Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase-Like Protein; HEAT Domain Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLVYVKKGKQNSQIIMEIKQIQVYLKSSDSQERLKALTELRNYESEIVVPLLKTRQQDPEFLVRSFVAMGLGNKRTPEGF
KILLEMMQNDPDYNVRAEAANSLSKFGAQAIPFLVEKFRQDNNWLMRRSILAPLIDMPFPEALYEVCMCAIADEDTTVQE
VAISALGKLAGTKKETEALQKLLAFVSAESWNIRLRAAQGLGKFDVPQAKAALNYLSKDDNYKVVAAALESSLS

Sequences:

>Translated_234_residues
MLVYVKKGKQNSQIIMEIKQIQVYLKSSDSQERLKALTELRNYESEIVVPLLKTRQQDPEFLVRSFVAMGLGNKRTPEGF
KILLEMMQNDPDYNVRAEAANSLSKFGAQAIPFLVEKFRQDNNWLMRRSILAPLIDMPFPEALYEVCMCAIADEDTTVQE
VAISALGKLAGTKKETEALQKLLAFVSAESWNIRLRAAQGLGKFDVPQAKAALNYLSKDDNYKVVAAALESSLS
>Mature_234_residues
MLVYVKKGKQNSQIIMEIKQIQVYLKSSDSQERLKALTELRNYESEIVVPLLKTRQQDPEFLVRSFVAMGLGNKRTPEGF
KILLEMMQNDPDYNVRAEAANSLSKFGAQAIPFLVEKFRQDNNWLMRRSILAPLIDMPFPEALYEVCMCAIADEDTTVQE
VAISALGKLAGTKKETEALQKLLAFVSAESWNIRLRAAQGLGKFDVPQAKAALNYLSKDDNYKVVAAALESSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26284; Mature: 26284

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYVKKGKQNSQIIMEIKQIQVYLKSSDSQERLKALTELRNYESEIVVPLLKTRQQDPE
CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH
FLVRSFVAMGLGNKRTPEGFKILLEMMQNDPDYNVRAEAANSLSKFGAQAIPFLVEKFRQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHC
DNNWLMRRSILAPLIDMPFPEALYEVCMCAIADEDTTVQEVAISALGKLAGTKKETEALQ
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
KLLAFVSAESWNIRLRAAQGLGKFDVPQAKAALNYLSKDDNYKVVAAALESSLS
HHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLVYVKKGKQNSQIIMEIKQIQVYLKSSDSQERLKALTELRNYESEIVVPLLKTRQQDPE
CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH
FLVRSFVAMGLGNKRTPEGFKILLEMMQNDPDYNVRAEAANSLSKFGAQAIPFLVEKFRQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHC
DNNWLMRRSILAPLIDMPFPEALYEVCMCAIADEDTTVQEVAISALGKLAGTKKETEALQ
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
KLLAFVSAESWNIRLRAAQGLGKFDVPQAKAALNYLSKDDNYKVVAAALESSLS
HHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA