Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476011

Identifier: 113476011

GI number: 113476011

Start: 3676131

End: 3676451

Strand: Direct

Name: 113476011

Synonym: Tery_2379

Alternate gene names: NA

Gene position: 3676131-3676451 (Clockwise)

Preceding gene: 113476010

Following gene: 113476012

Centisome position: 47.43

GC content: 48.29

Gene sequence:

>321_bases
TTGTCTGGCTATTGGCGGTTCCAAGAGTTAAGAAGTAGCTACAGTGACTGGGTTGAGCTTGCAATGGTAAGAGGCGATAT
AGCTGCCCATCGGTTCCGCAAAAGCTCAACGGTTTTACAAAGGAAGACCAGCAGCGAATGCAGATGGTCGTCACCAGAAC
CAGGGAGCAAAACCTTTGCTCCCGGAACAGCAGCAAGCTCTACTGGTACAACTTTTAGAAGGAGTGCCTCCTGGTGGAGG
GATATAGAGCGACCCAAAGGTAGCGCTCTGAGGGAGAGTGTAGTACAAGCAAAAGGTCCACTAAACTTAGAAAATAAATA
A

Upstream 100 bases:

>100_bases
AAGCGTTTGAGTCTCAAAGAGCATATTTCTGCAGCTAGACTTTAGGAAAAAAACGAAATCAAACTACCTTAGTCTATCTC
CAAACCAACTCAGTGGGACA

Downstream 100 bases:

>100_bases
GTTTTATTTTTTTATTTTAATTAATGTATTATTCAGCTTATTCTCTAAAAGTACCATTGTATCTACCTAAAACCTTGCTT
GTAAGCACTTGAGAGTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFAPGTAASSTGTTFRRSASWWR
DIERPKGSALRESVVQAKGPLNLENK

Sequences:

>Translated_106_residues
MSGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFAPGTAASSTGTTFRRSASWWR
DIERPKGSALRESVVQAKGPLNLENK
>Mature_105_residues
SGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFAPGTAASSTGTTFRRSASWWRD
IERPKGSALRESVVQAKGPLNLENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11985; Mature: 11854

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PGTAASSTGTTFRRSASWWRDIERPKGSALRESVVQAKGPLNLENK
CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PGTAASSTGTTFRRSASWWRDIERPKGSALRESVVQAKGPLNLENK
CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA