| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476011
Identifier: 113476011
GI number: 113476011
Start: 3676131
End: 3676451
Strand: Direct
Name: 113476011
Synonym: Tery_2379
Alternate gene names: NA
Gene position: 3676131-3676451 (Clockwise)
Preceding gene: 113476010
Following gene: 113476012
Centisome position: 47.43
GC content: 48.29
Gene sequence:
>321_bases TTGTCTGGCTATTGGCGGTTCCAAGAGTTAAGAAGTAGCTACAGTGACTGGGTTGAGCTTGCAATGGTAAGAGGCGATAT AGCTGCCCATCGGTTCCGCAAAAGCTCAACGGTTTTACAAAGGAAGACCAGCAGCGAATGCAGATGGTCGTCACCAGAAC CAGGGAGCAAAACCTTTGCTCCCGGAACAGCAGCAAGCTCTACTGGTACAACTTTTAGAAGGAGTGCCTCCTGGTGGAGG GATATAGAGCGACCCAAAGGTAGCGCTCTGAGGGAGAGTGTAGTACAAGCAAAAGGTCCACTAAACTTAGAAAATAAATA A
Upstream 100 bases:
>100_bases AAGCGTTTGAGTCTCAAAGAGCATATTTCTGCAGCTAGACTTTAGGAAAAAAACGAAATCAAACTACCTTAGTCTATCTC CAAACCAACTCAGTGGGACA
Downstream 100 bases:
>100_bases GTTTTATTTTTTTATTTTAATTAATGTATTATTCAGCTTATTCTCTAAAAGTACCATTGTATCTACCTAAAACCTTGCTT GTAAGCACTTGAGAGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFAPGTAASSTGTTFRRSASWWR DIERPKGSALRESVVQAKGPLNLENK
Sequences:
>Translated_106_residues MSGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFAPGTAASSTGTTFRRSASWWR DIERPKGSALRESVVQAKGPLNLENK >Mature_105_residues SGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFAPGTAASSTGTTFRRSASWWRD IERPKGSALRESVVQAKGPLNLENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11985; Mature: 11854
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PGTAASSTGTTFRRSASWWRDIERPKGSALRESVVQAKGPLNLENK CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGYWRFQELRSSYSDWVELAMVRGDIAAHRFRKSSTVLQRKTSSECRWSSPEPGSKTFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PGTAASSTGTTFRRSASWWRDIERPKGSALRESVVQAKGPLNLENK CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA