Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475764

Identifier: 113475764

GI number: 113475764

Start: 3308007

End: 3309710

Strand: Direct

Name: 113475764

Synonym: Tery_2117

Alternate gene names: NA

Gene position: 3308007-3309710 (Clockwise)

Preceding gene: 113475763

Following gene: 113475769

Centisome position: 42.68

GC content: 35.04

Gene sequence:

>1704_bases
ATGGAAAAAGTAGCTCAAAAAAACAACAACCTTACAAGTAATTATTATGGTTTGAGCCGTTGGTTAAAATCTCTAACTCT
AGGCATAATTCCTGCTATTTTAACTGCTTTACCAGTGAATGCAGCCAAGCATATTTCTGTTGGTCACGAAGGTTTAAATA
CTTTGATTTCAGTATCAGCATTAGAAAGTTATGTTCAAAATGGAGAAATTAACTATGAACTAGCTAGCTATATGCTACTT
TTAGAAGCTGAAGACGAACAGGAATACCGAGACTTCTTGCAAACTCGCTACAATTTTCCACCTCAAATAGTTGCTCAATT
TCTTCACTCACCTATGGGAAAATTATTCCTCAACAGTTTAGGAGAAGTAATTAAAACTCATTCAGTTAATAGTGGTTCAT
CCTCTATTGAAAATGGTGCAGAAGCAATTAAAACAGCCTTATTAAAATCTGCAAATGACTCTGCAGGCTTAAGTATTATA
AATTTTGTCCGTCATTTTCCCAGTGATGTTATGTGGCTAGAAGCAAAAAAAATTGTAGCTGTGACTGAAAAAATTTCTAC
TGTAGAACAAGAGACAAAAGCTTTGGTTGAAACAGTAGCAGAACTAACATTAAAAGAAGCTAATCAAGAAAAAAGAGTAG
ATTTCTCGCAATTACCGGATATTAGGAAAAAGGGAAAATATAGCTTTTCACAACAAAAAATTACTCTAGAAGATACCGGA
CGTAATCGCAATTTTTCAGCCCAATTTTATTTGCCAAATATATCTTCAGAAGAAACCTCAATTCCTGTAGTAGTTATTTC
TCATGGTTTAGGTTCTAATGGGGTAAACTTCCAGAGCTTGGCCGAACATTTAGCCTCTTATGGATTTGCTGTTGCCCTAC
CTCAACATAGAGGTAGTAATTATGAATATATCCAGAAATTCTTAGCAGGTAAAACTCAAGATATGTTTCAAGGGAATGAG
TTTATCGATCGCCCTTTAGATATTTCTTTCTTATTAAATGAATTAGAACAGTTAAATAAATATCAATTACAAGGTCAGTT
AAACTTAGAAAAAGTTGGCATATTTGGTCATTCTTTTGGAGCCTCTACGGCCTTTGCCTTAGCAGGTGCAGAGATTAACT
TTAATCAGCTCCAACAAGACTGTGGTCCACAAATGGAAATTTTGAATATGTCGCTGCTGCTACAGTGCCGTGCTTTGGAA
TTGAAACCACAAAAATATAACTTGAAAGATGATAGAATTGGAGCAATATTTGTACTTGACCCAGTGAATAGTAGTTTATT
TGGAAAAGCTGGTATCAGTCAGATTAAGTTACCTGTTTTATGGGGAAGTGGGAGTGAAGATAAAATTACTCCCATAGTTT
TAGAACAAGCAAACTCTTTTACTTGGTTGCCAACTACCAATAAATATTTGGTATTAACAGAGGGAGCAGATCATATTAAT
ATTAATCTGGGTGCAGTTAACAAAAATGCCTTTACTTCTTTAGAAGAGTTAATTAAGCCAGACCCAGAAGTAGTAGTTGG
TTATGCTAATGCTTTTGGTTTAGCATTTTTCCAAAGCCACGTTGCCGATCGCCCTGAATATCATTCTTATTTACAAGCAT
CTTATGCTAAGGCGATCAGCGAGCGACCTTTTAATCTGAGTTTAGTGCGTTTTTTGCCAGAAACTCAGTTAAACAAAGTA
TCAAAACAAGCAAGGAAAGACTAA

Upstream 100 bases:

>100_bases
GCTATTTGAAAAGAAGCAACAACAATTGGTTATCATCTTTCTCCAAAAATATTAAGAGAAAGATGAAAAGTTATTTATTA
ATTATAAGGGGTAATTAACC

Downstream 100 bases:

>100_bases
TTAAGGTTTATTGAAAAAGTCTTTTTGGGGAATAGGGAATAGAGATAAATAGAAATTATAGAGCAGGTGGTTGGATATAT
TTGTCCTTTGCGAACCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MEKVAQKNNNLTSNYYGLSRWLKSLTLGIIPAILTALPVNAAKHISVGHEGLNTLISVSALESYVQNGEINYELASYMLL
LEAEDEQEYRDFLQTRYNFPPQIVAQFLHSPMGKLFLNSLGEVIKTHSVNSGSSSIENGAEAIKTALLKSANDSAGLSII
NFVRHFPSDVMWLEAKKIVAVTEKISTVEQETKALVETVAELTLKEANQEKRVDFSQLPDIRKKGKYSFSQQKITLEDTG
RNRNFSAQFYLPNISSEETSIPVVVISHGLGSNGVNFQSLAEHLASYGFAVALPQHRGSNYEYIQKFLAGKTQDMFQGNE
FIDRPLDISFLLNELEQLNKYQLQGQLNLEKVGIFGHSFGASTAFALAGAEINFNQLQQDCGPQMEILNMSLLLQCRALE
LKPQKYNLKDDRIGAIFVLDPVNSSLFGKAGISQIKLPVLWGSGSEDKITPIVLEQANSFTWLPTTNKYLVLTEGADHIN
INLGAVNKNAFTSLEELIKPDPEVVVGYANAFGLAFFQSHVADRPEYHSYLQASYAKAISERPFNLSLVRFLPETQLNKV
SKQARKD

Sequences:

>Translated_567_residues
MEKVAQKNNNLTSNYYGLSRWLKSLTLGIIPAILTALPVNAAKHISVGHEGLNTLISVSALESYVQNGEINYELASYMLL
LEAEDEQEYRDFLQTRYNFPPQIVAQFLHSPMGKLFLNSLGEVIKTHSVNSGSSSIENGAEAIKTALLKSANDSAGLSII
NFVRHFPSDVMWLEAKKIVAVTEKISTVEQETKALVETVAELTLKEANQEKRVDFSQLPDIRKKGKYSFSQQKITLEDTG
RNRNFSAQFYLPNISSEETSIPVVVISHGLGSNGVNFQSLAEHLASYGFAVALPQHRGSNYEYIQKFLAGKTQDMFQGNE
FIDRPLDISFLLNELEQLNKYQLQGQLNLEKVGIFGHSFGASTAFALAGAEINFNQLQQDCGPQMEILNMSLLLQCRALE
LKPQKYNLKDDRIGAIFVLDPVNSSLFGKAGISQIKLPVLWGSGSEDKITPIVLEQANSFTWLPTTNKYLVLTEGADHIN
INLGAVNKNAFTSLEELIKPDPEVVVGYANAFGLAFFQSHVADRPEYHSYLQASYAKAISERPFNLSLVRFLPETQLNKV
SKQARKD
>Mature_567_residues
MEKVAQKNNNLTSNYYGLSRWLKSLTLGIIPAILTALPVNAAKHISVGHEGLNTLISVSALESYVQNGEINYELASYMLL
LEAEDEQEYRDFLQTRYNFPPQIVAQFLHSPMGKLFLNSLGEVIKTHSVNSGSSSIENGAEAIKTALLKSANDSAGLSII
NFVRHFPSDVMWLEAKKIVAVTEKISTVEQETKALVETVAELTLKEANQEKRVDFSQLPDIRKKGKYSFSQQKITLEDTG
RNRNFSAQFYLPNISSEETSIPVVVISHGLGSNGVNFQSLAEHLASYGFAVALPQHRGSNYEYIQKFLAGKTQDMFQGNE
FIDRPLDISFLLNELEQLNKYQLQGQLNLEKVGIFGHSFGASTAFALAGAEINFNQLQQDCGPQMEILNMSLLLQCRALE
LKPQKYNLKDDRIGAIFVLDPVNSSLFGKAGISQIKLPVLWGSGSEDKITPIVLEQANSFTWLPTTNKYLVLTEGADHIN
INLGAVNKNAFTSLEELIKPDPEVVVGYANAFGLAFFQSHVADRPEYHSYLQASYAKAISERPFNLSLVRFLPETQLNKV
SKQARKD

Specific function: Unknown

COG id: COG4188

COG function: function code R; Predicted dienelactone hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63040; Mature: 63040

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVAQKNNNLTSNYYGLSRWLKSLTLGIIPAILTALPVNAAKHISVGHEGLNTLISVSA
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHH
LESYVQNGEINYELASYMLLLEAEDEQEYRDFLQTRYNFPPQIVAQFLHSPMGKLFLNSL
HHHHHHCCCCCEEHHHEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHH
GEVIKTHSVNSGSSSIENGAEAIKTALLKSANDSAGLSIINFVRHFPSDVMWLEAKKIVA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHH
VTEKISTVEQETKALVETVAELTLKEANQEKRVDFSQLPDIRKKGKYSFSQQKITLEDTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHCCCHHHCCCCCCCCCEEEEEECC
RNRNFSAQFYLPNISSEETSIPVVVISHGLGSNGVNFQSLAEHLASYGFAVALPQHRGSN
CCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCC
YEYIQKFLAGKTQDMFQGNEFIDRPLDISFLLNELEQLNKYQLQGQLNLEKVGIFGHSFG
HHHHHHHHCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
ASTAFALAGAEINFNQLQQDCGPQMEILNMSLLLQCRALELKPQKYNLKDDRIGAIFVLD
CCHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEC
PVNSSLFGKAGISQIKLPVLWGSGSEDKITPIVLEQANSFTWLPTTNKYLVLTEGADHIN
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCEEEEECCCCEEE
INLGAVNKNAFTSLEELIKPDPEVVVGYANAFGLAFFQSHVADRPEYHSYLQASYAKAIS
EEEEECCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ERPFNLSLVRFLPETQLNKVSKQARKD
CCCCCCHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKVAQKNNNLTSNYYGLSRWLKSLTLGIIPAILTALPVNAAKHISVGHEGLNTLISVSA
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHH
LESYVQNGEINYELASYMLLLEAEDEQEYRDFLQTRYNFPPQIVAQFLHSPMGKLFLNSL
HHHHHHCCCCCEEHHHEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHH
GEVIKTHSVNSGSSSIENGAEAIKTALLKSANDSAGLSIINFVRHFPSDVMWLEAKKIVA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHH
VTEKISTVEQETKALVETVAELTLKEANQEKRVDFSQLPDIRKKGKYSFSQQKITLEDTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHCCCHHHCCCCCCCCCEEEEEECC
RNRNFSAQFYLPNISSEETSIPVVVISHGLGSNGVNFQSLAEHLASYGFAVALPQHRGSN
CCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCC
YEYIQKFLAGKTQDMFQGNEFIDRPLDISFLLNELEQLNKYQLQGQLNLEKVGIFGHSFG
HHHHHHHHCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
ASTAFALAGAEINFNQLQQDCGPQMEILNMSLLLQCRALELKPQKYNLKDDRIGAIFVLD
CCHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEC
PVNSSLFGKAGISQIKLPVLWGSGSEDKITPIVLEQANSFTWLPTTNKYLVLTEGADHIN
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCEEEEECCCCEEE
INLGAVNKNAFTSLEELIKPDPEVVVGYANAFGLAFFQSHVADRPEYHSYLQASYAKAIS
EEEEECCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ERPFNLSLVRFLPETQLNKVSKQARKD
CCCCCCHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA