| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475713
Identifier: 113475713
GI number: 113475713
Start: 3213305
End: 3214297
Strand: Direct
Name: 113475713
Synonym: Tery_2060
Alternate gene names: NA
Gene position: 3213305-3214297 (Clockwise)
Preceding gene: 113475712
Following gene: 113475714
Centisome position: 41.46
GC content: 41.99
Gene sequence:
>993_bases ATGAATTTTCCATTTTACTTTGGTGACGGAAAACGGAAACCAAATAATACACCAGCTACTCTACCTGTGTCGCGACGAGC CGAATTTATCAAACCAGAAAATTATTTGGCAGATCCTGGTCTTCGCGATGCCTGCAACGTTGCTTTACTCTTGGGTCAAC CCTTATTACTTACTGGAGAACCCGGTACTGGCAAGACTTTGTTCTCTTATAGTCTAGCCTGGGAATTGGGTTTTGACGAA CCACTGAAGTTTGAAACCAAGTCTACCAGCACTGCCCGGGATTTATTTTACAGCTATGACTCCTTGAAACAATTTCAAGA TGCCCAAAACAGTATATTAGACAGAAAACCTCTAGACTATCTGACATACAATGCTTTGGGTCAAGCCATCTTGCTCACTA AAGAGCCCTCTGAAATTGAGAACTTTGTACCTCCAGATTTTTTTCACCCTGGTAAAAGACGCTCTATCGTTCTCATTGAC GAAGTAGATAAAGCATCCCGTGATTTTCCTAATGATATCCTCAACGAATTGGAGTATCTATACTTTCGGGTCCGAGAACT GGGCAATATCAAGATTGAAGCTAACTCCAAACTACAGCCTATAGTCGTCATTACCAGCAACTCTGAGAAAGACCTTCCGG ATGCATTTTTGCGGCGTTGTGTTTACTACAATATTCCTTTTCCACAAAAAGAGCGCCTTGAGAATATTGTTACCAATAGA CTAGGTTTGTACTCTGCTGGTAGTAGTGACTTTCTCCAGGACGCTCTAGATATTTTTTTTCAGCTACGAAAAAGCGGCTT GCGGAAGAAACCGACTACTTCTGAACTTTTGGGTTGGATGATAGCGCTCCAAGAAATTTCAGGCGGTGCAGAAAACCCCC TGGTTCAGTCTGAGCTGGCTCTGCAAACCTTGAGTAATTTGATTAAAACTGCTGAGGATCAAGATAAAGCTAAGGAGATA ATGAAGCAATGGGTAAAAAGTCGCCAAAGTTAA
Upstream 100 bases:
>100_bases GGGAGAAACAGCAAGCATCTGATACTATGCCTATGTCTAATTTAGCTATAAAATTGACTGATATTTTGATGGGAAAAATA CCTATCAAGGAGGATACTGC
Downstream 100 bases:
>100_bases GCCCAGGGTGGCTAGAACCAGAACAGTTGATGGAATTCATTGATCAGCTTCGTAGAGAATACAAATACAATATCGGTGTA TCCCAATATATTGCAGCTCA
Product: ATPase-like protein
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; AAA Family ATPase; AAA ATPase; MoxR-Like ATPase; ATPase AAA Family Protein; AAA_5 ATPase; ATPase-Like Protein; Oxidoreductase; ATPase Associated With Various Cellular Activities; ATPase Aaa Family; Carbon Monoxide Dehydrogenase D Protein; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; ATPase Protein
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGEPGTGKTLFSYSLAWELGFDE PLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDYLTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLID EVDKASRDFPNDILNELEYLYFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELALQTLSNLIKTAEDQDKAKEI MKQWVKSRQS
Sequences:
>Translated_330_residues MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGEPGTGKTLFSYSLAWELGFDE PLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDYLTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLID EVDKASRDFPNDILNELEYLYFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELALQTLSNLIKTAEDQDKAKEI MKQWVKSRQS >Mature_330_residues MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGEPGTGKTLFSYSLAWELGFDE PLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDYLTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLID EVDKASRDFPNDILNELEYLYFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELALQTLSNLIKTAEDQDKAKEI MKQWVKSRQS
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37534; Mature: 37534
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGE CCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCHHEECCCEEEECC PGTGKTLFSYSLAWELGFDEPLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDY CCCCCEEEEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLIDEVDKASRDFPNDILNELEYL HHHHHHCCEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHH YFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR HHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHH LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH LQTLSNLIKTAEDQDKAKEIMKQWVKSRQS HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGE CCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCHHEECCCEEEECC PGTGKTLFSYSLAWELGFDEPLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDY CCCCCEEEEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLIDEVDKASRDFPNDILNELEYL HHHHHHCCEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHH YFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR HHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHH LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH LQTLSNLIKTAEDQDKAKEIMKQWVKSRQS HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA