Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475713

Identifier: 113475713

GI number: 113475713

Start: 3213305

End: 3214297

Strand: Direct

Name: 113475713

Synonym: Tery_2060

Alternate gene names: NA

Gene position: 3213305-3214297 (Clockwise)

Preceding gene: 113475712

Following gene: 113475714

Centisome position: 41.46

GC content: 41.99

Gene sequence:

>993_bases
ATGAATTTTCCATTTTACTTTGGTGACGGAAAACGGAAACCAAATAATACACCAGCTACTCTACCTGTGTCGCGACGAGC
CGAATTTATCAAACCAGAAAATTATTTGGCAGATCCTGGTCTTCGCGATGCCTGCAACGTTGCTTTACTCTTGGGTCAAC
CCTTATTACTTACTGGAGAACCCGGTACTGGCAAGACTTTGTTCTCTTATAGTCTAGCCTGGGAATTGGGTTTTGACGAA
CCACTGAAGTTTGAAACCAAGTCTACCAGCACTGCCCGGGATTTATTTTACAGCTATGACTCCTTGAAACAATTTCAAGA
TGCCCAAAACAGTATATTAGACAGAAAACCTCTAGACTATCTGACATACAATGCTTTGGGTCAAGCCATCTTGCTCACTA
AAGAGCCCTCTGAAATTGAGAACTTTGTACCTCCAGATTTTTTTCACCCTGGTAAAAGACGCTCTATCGTTCTCATTGAC
GAAGTAGATAAAGCATCCCGTGATTTTCCTAATGATATCCTCAACGAATTGGAGTATCTATACTTTCGGGTCCGAGAACT
GGGCAATATCAAGATTGAAGCTAACTCCAAACTACAGCCTATAGTCGTCATTACCAGCAACTCTGAGAAAGACCTTCCGG
ATGCATTTTTGCGGCGTTGTGTTTACTACAATATTCCTTTTCCACAAAAAGAGCGCCTTGAGAATATTGTTACCAATAGA
CTAGGTTTGTACTCTGCTGGTAGTAGTGACTTTCTCCAGGACGCTCTAGATATTTTTTTTCAGCTACGAAAAAGCGGCTT
GCGGAAGAAACCGACTACTTCTGAACTTTTGGGTTGGATGATAGCGCTCCAAGAAATTTCAGGCGGTGCAGAAAACCCCC
TGGTTCAGTCTGAGCTGGCTCTGCAAACCTTGAGTAATTTGATTAAAACTGCTGAGGATCAAGATAAAGCTAAGGAGATA
ATGAAGCAATGGGTAAAAAGTCGCCAAAGTTAA

Upstream 100 bases:

>100_bases
GGGAGAAACAGCAAGCATCTGATACTATGCCTATGTCTAATTTAGCTATAAAATTGACTGATATTTTGATGGGAAAAATA
CCTATCAAGGAGGATACTGC

Downstream 100 bases:

>100_bases
GCCCAGGGTGGCTAGAACCAGAACAGTTGATGGAATTCATTGATCAGCTTCGTAGAGAATACAAATACAATATCGGTGTA
TCCCAATATATTGCAGCTCA

Product: ATPase-like protein

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; AAA Family ATPase; AAA ATPase; MoxR-Like ATPase; ATPase AAA Family Protein; AAA_5 ATPase; ATPase-Like Protein; Oxidoreductase; ATPase Associated With Various Cellular Activities; ATPase Aaa Family; Carbon Monoxide Dehydrogenase D Protein; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; ATPase Protein

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGEPGTGKTLFSYSLAWELGFDE
PLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDYLTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLID
EVDKASRDFPNDILNELEYLYFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR
LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELALQTLSNLIKTAEDQDKAKEI
MKQWVKSRQS

Sequences:

>Translated_330_residues
MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGEPGTGKTLFSYSLAWELGFDE
PLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDYLTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLID
EVDKASRDFPNDILNELEYLYFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR
LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELALQTLSNLIKTAEDQDKAKEI
MKQWVKSRQS
>Mature_330_residues
MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGEPGTGKTLFSYSLAWELGFDE
PLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDYLTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLID
EVDKASRDFPNDILNELEYLYFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR
LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELALQTLSNLIKTAEDQDKAKEI
MKQWVKSRQS

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37534; Mature: 37534

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGE
CCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCHHEECCCEEEECC
PGTGKTLFSYSLAWELGFDEPLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDY
CCCCCEEEEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLIDEVDKASRDFPNDILNELEYL
HHHHHHCCEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHH
YFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR
HHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHH
LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LQTLSNLIKTAEDQDKAKEIMKQWVKSRQS
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFPFYFGDGKRKPNNTPATLPVSRRAEFIKPENYLADPGLRDACNVALLLGQPLLLTGE
CCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCHHEECCCEEEECC
PGTGKTLFSYSLAWELGFDEPLKFETKSTSTARDLFYSYDSLKQFQDAQNSILDRKPLDY
CCCCCEEEEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LTYNALGQAILLTKEPSEIENFVPPDFFHPGKRRSIVLIDEVDKASRDFPNDILNELEYL
HHHHHHCCEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHH
YFRVRELGNIKIEANSKLQPIVVITSNSEKDLPDAFLRRCVYYNIPFPQKERLENIVTNR
HHHHHHHCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHH
LGLYSAGSSDFLQDALDIFFQLRKSGLRKKPTTSELLGWMIALQEISGGAENPLVQSELA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LQTLSNLIKTAEDQDKAKEIMKQWVKSRQS
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA