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The map label for this gene is 113475711

Identifier: 113475711

GI number: 113475711

Start: 3210893

End: 3211867

Strand: Direct

Name: 113475711

Synonym: Tery_2058

Alternate gene names: NA

Gene position: 3210893-3211867 (Clockwise)

Preceding gene: 113475710

Following gene: 113475712

Centisome position: 41.43

GC content: 42.97

Gene sequence:

>975_bases
ATGTCCCAGACTTTCAACCAAGGATACGCTGTTGTTATCGGAGTAGGTGATGATTTGCCGATCACAATTGATGATGCTAC
TGCCATTGCCAATGTATTGGGTGATTTATCTCGTTGCGCCTATCCTACTGATCAAGTGCGTTTACTAACAGGTGAAAAAG
CAAACCGTGCCAATGTTCTATCTGCTTTGAGCTGGCTGGCTGAGACCACGGGAAAAGATGACACGGCGATCGTTTATTTT
TCTGGTCATGGAATTGAAAAACCAGATTATTATTTGATGCCTTATGGTTATAATTTAGAAAATTTGGAGGGTACAGCTAT
TCGAGGCGAAACTTTTACGGAGTGTCTGAGAGCTATTAAAACTAAAAAATTACTGGTACTGTTAGACTGCTGCCATGCTG
GTGGACAGGCAGACCCTAAGGGAATTATAAAATCACCTCTACCTCCATCGGCGATCGCTCAGTTGGGGAGCAGTAGTGGT
AGGGTTATACTTGCTTCTTCGCGAAAAGATGAACTATCTTGGACGGGAAAGCCATACAGTGTTTTTACTGTAGCATTGTT
GGAGGCTTTGGCTGGTTATGGCATATTTGAACAAGACGGCTATGCTCGCGTTTTGGATCTTGCTATGTGGGTCGGACGCA
AAGTCCCAGAACGTACAGGGGATGAACAGCACCCTATCATCAAGGTCTCTAATTTAGAGGATAATTTTGCTTTGGCTTGG
TATGCTGGGGGGGAGAAAAGTGTGCGCCCATTGCCAAAATGGGAAACTAATATTCCATCTATTACACCAGGGTTGGATAT
TGAACAGGTGGCTACCTGGCGACGGATGTTGGCTAACTATCGTGAAAATCTTCTGTTAATTGAAGAACGCATGAGTGAAT
TTGTTGAATTTACTGATGTTCCACTAACACTTTTGAAAAATAAACGTCGGATAGAGGCGGAAATAACTAAGTTGGAAAAA
AAATTGGGGGGTTAA

Upstream 100 bases:

>100_bases
CTTTTTGCCTTTTACTGTCTAACTTTTGGGAGTTTTTAACGATCATAATAGCTAATGCTATGATTAAATTATATTTTCCA
TCTTAATAAGAAGCAAAATT

Downstream 100 bases:

>100_bases
CTACTGAGGCCGAATAGTTAAAAGTTGGAGAAATGTTAATGAATATTGAAAGTATGCTGATTATCTACTATCATAGATTA
AGTTTTTTTCAAAAAATTAC

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: DEAD/DEAH Box Helicase Domain-Containing Protein; Caspase Domain Protein; Polysaccharide Deacetylase; OmpA/MotB; Peptidase C; Polysaccharide Deacetylase Family Protein; Helicase; WD-40 Repeat-Containing Protein; Wd40 Repeat Subgroup

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSQTFNQGYAVVIGVGDDLPITIDDATAIANVLGDLSRCAYPTDQVRLLTGEKANRANVLSALSWLAETTGKDDTAIVYF
SGHGIEKPDYYLMPYGYNLENLEGTAIRGETFTECLRAIKTKKLLVLLDCCHAGGQADPKGIIKSPLPPSAIAQLGSSSG
RVILASSRKDELSWTGKPYSVFTVALLEALAGYGIFEQDGYARVLDLAMWVGRKVPERTGDEQHPIIKVSNLEDNFALAW
YAGGEKSVRPLPKWETNIPSITPGLDIEQVATWRRMLANYRENLLLIEERMSEFVEFTDVPLTLLKNKRRIEAEITKLEK
KLGG

Sequences:

>Translated_324_residues
MSQTFNQGYAVVIGVGDDLPITIDDATAIANVLGDLSRCAYPTDQVRLLTGEKANRANVLSALSWLAETTGKDDTAIVYF
SGHGIEKPDYYLMPYGYNLENLEGTAIRGETFTECLRAIKTKKLLVLLDCCHAGGQADPKGIIKSPLPPSAIAQLGSSSG
RVILASSRKDELSWTGKPYSVFTVALLEALAGYGIFEQDGYARVLDLAMWVGRKVPERTGDEQHPIIKVSNLEDNFALAW
YAGGEKSVRPLPKWETNIPSITPGLDIEQVATWRRMLANYRENLLLIEERMSEFVEFTDVPLTLLKNKRRIEAEITKLEK
KLGG
>Mature_323_residues
SQTFNQGYAVVIGVGDDLPITIDDATAIANVLGDLSRCAYPTDQVRLLTGEKANRANVLSALSWLAETTGKDDTAIVYFS
GHGIEKPDYYLMPYGYNLENLEGTAIRGETFTECLRAIKTKKLLVLLDCCHAGGQADPKGIIKSPLPPSAIAQLGSSSGR
VILASSRKDELSWTGKPYSVFTVALLEALAGYGIFEQDGYARVLDLAMWVGRKVPERTGDEQHPIIKVSNLEDNFALAWY
AGGEKSVRPLPKWETNIPSITPGLDIEQVATWRRMLANYRENLLLIEERMSEFVEFTDVPLTLLKNKRRIEAEITKLEKK
LGG

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35741; Mature: 35610

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTFNQGYAVVIGVGDDLPITIDDATAIANVLGDLSRCAYPTDQVRLLTGEKANRANVL
CCCCCCCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
SALSWLAETTGKDDTAIVYFSGHGIEKPDYYLMPYGYNLENLEGTAIRGETFTECLRAIK
HHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEECCHHHHHHHHHHH
TKKLLVLLDCCHAGGQADPKGIIKSPLPPSAIAQLGSSSGRVILASSRKDELSWTGKPYS
HHHHHEEEEHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHH
VFTVALLEALAGYGIFEQDGYARVLDLAMWVGRKVPERTGDEQHPIIKVSNLEDNFALAW
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEE
YAGGEKSVRPLPKWETNIPSITPGLDIEQVATWRRMLANYRENLLLIEERMSEFVEFTDV
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHCCC
PLTLLKNKRRIEAEITKLEKKLGG
CHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQTFNQGYAVVIGVGDDLPITIDDATAIANVLGDLSRCAYPTDQVRLLTGEKANRANVL
CCCCCCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
SALSWLAETTGKDDTAIVYFSGHGIEKPDYYLMPYGYNLENLEGTAIRGETFTECLRAIK
HHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEECCHHHHHHHHHHH
TKKLLVLLDCCHAGGQADPKGIIKSPLPPSAIAQLGSSSGRVILASSRKDELSWTGKPYS
HHHHHEEEEHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHH
VFTVALLEALAGYGIFEQDGYARVLDLAMWVGRKVPERTGDEQHPIIKVSNLEDNFALAW
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEE
YAGGEKSVRPLPKWETNIPSITPGLDIEQVATWRRMLANYRENLLLIEERMSEFVEFTDV
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHCCC
PLTLLKNKRRIEAEITKLEKKLGG
CHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA