Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475710

Identifier: 113475710

GI number: 113475710

Start: 3209480

End: 3210550

Strand: Direct

Name: 113475710

Synonym: Tery_2057

Alternate gene names: NA

Gene position: 3209480-3210550 (Clockwise)

Preceding gene: 113475709

Following gene: 113475711

Centisome position: 41.41

GC content: 35.39

Gene sequence:

>1071_bases
ATGAAGCGCTCTCTATTTTTATTTATAAGTTTAGCTGTTTTAAGTTTAACATCCTGTAGCGCTGCCAAGGAAGTTCAGGA
ATTAATTCAGGAATTAATTGATCCCACGCCACCACAGACATCGACCACATCTCCTGTTAAACAAAAAGAACAAAGAAAGT
TATTTCCAATTCAGCAAAAAGGAAAATATGGTTATATCAATAAAATGGGCAAAATATTGATTCCACCAAAATTTGAACAG
GTGAAAAATTTCTCAGAGGGATTAGCAGCAGTAAAAATTGGAGAAAAATGGGGTTATATTAATGAAATGGGAAAAATAGT
CATCAGCCCAAAATTTGATTCTGCTTTACGTTTTTCCCAAGGGTTAGCACCAGTGAAAAAAGTTGCTCAAAGATGGAGCT
ATATTAACCAGAATGGAGAAATAGTAATTCAACCAGAGTTTGAAGATGCAGTCTATTTTTCCGAAGGGTTAGCACGAGTT
ACAATTGATGGTAACTGGGGTTATGTTGATAGAATGGGCAAAATAGTAATCAAATCAAAATATGGAGGACAAACTGGGCG
GGGTTTTTTTGTTGAGGGATTAGCTGCTGTGAGGGTCGGGGCTGGCTATAAATATGGATATATAGATCAGGCTGGAGAAA
TGGTCATTACAGAACAATATAATTTTGCTGGAGACTTTGTTAATGGTTTAGCGAGGGTTCAAATTTTTGATGTTTGGGGG
TATATTGATAAAACTGGTAGAGAAGTCATTAGACCAAACTTTGAATTTAGTCAAGATTTTTCTGAGGGTTTAGCAGCAGT
TAAAATTAAAGATAAGTATGGCTATATTGATGTTTCCGGAAAAAGAGTTATTCAACCGAAGTATGATTATGCTGGCAGTT
TTTCTGAAGGTCTAGCAGAAGTAAGGATAGATGACAAATATGGCTACATTAATGCTAAGAATGAGATCATTATTGAGCCG
GAGTTTGATAATGCTTTTGCTTTTTCTAATGGTATTGCAGAAGTGTGGGTAGATGACAAAAAGGGTTACATAGATAAAAT
TGGTAGGTTTGTCTGGAATTTAAGTAATTGA

Upstream 100 bases:

>100_bases
CGACTCTCCTACGGAAAAATTAGTCAGAGATTACTTTTGACTTTTGACTTTCCAATAGGGGATAATTTGTGAGTTAAAAA
CTGGAGGAAAATTTTATCAA

Downstream 100 bases:

>100_bases
TAGCGCTTATATAGCAACTATCATACTGGAGGGTACAAAGTTGTATCTGGCGCGAGAGTAGGGATCAGGTAGGGATGTGG
CAAGTGCTAGCACAAGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: KWG Repeat Protein; KWG Repeat-Containing Protein; Kwg Repeat Protein; Serine/Threonine Protein Kinase; KWG Leptospira; TPR Repeat-Containing Protein; Lipoprotein; Kwg Leptospira Repeat Protein; KWG Protein; Phospholipase A; KWG Leptospira Repeat-Containing Protein; KWG Leptospira Family Protein; KWG Leptospira Family

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQKGKYGYINKMGKILIPPKFEQ
VKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQGLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARV
TIDGNWGYVDRMGKIVIKSKYGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG
YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAEVRIDDKYGYINAKNEIIIEP
EFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN

Sequences:

>Translated_356_residues
MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQKGKYGYINKMGKILIPPKFEQ
VKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQGLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARV
TIDGNWGYVDRMGKIVIKSKYGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG
YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAEVRIDDKYGYINAKNEIIIEP
EFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN
>Mature_356_residues
MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQKGKYGYINKMGKILIPPKFEQ
VKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQGLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARV
TIDGNWGYVDRMGKIVIKSKYGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG
YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAEVRIDDKYGYINAKNEIIIEP
EFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40075; Mature: 40075

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQK
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
GKYGYINKMGKILIPPKFEQVKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQ
CCCCCHHCCCCEECCCCHHHHHHHHCCCEEEEECCCCCCHHHCCCEEECCCCCHHHHHHC
GLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARVTIDGNWGYVDRMGKIVIKSK
CCHHHHHHHHHHHHCCCCCCEEEEECCCCHHEECCCEEEEEECCCCCCHHCCCEEEEEEC
YGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG
CCCCCCCCHHHHHHHHEEECCCCEECEECCCCCEEEEECCCCCHHHHHHHHEEEEEEECC
YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAE
CHHHCCHHHHCCCCCCHHHHHCCEEEEEEECCCCEEEECCCEEECCCCCCCCCHHCCCEE
VRIDDKYGYINAKNEIIIEPEFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN
EEEECCCCEEECCCEEEEECCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQK
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
GKYGYINKMGKILIPPKFEQVKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQ
CCCCCHHCCCCEECCCCHHHHHHHHCCCEEEEECCCCCCHHHCCCEEECCCCCHHHHHHC
GLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARVTIDGNWGYVDRMGKIVIKSK
CCHHHHHHHHHHHHCCCCCCEEEEECCCCHHEECCCEEEEEECCCCCCHHCCCEEEEEEC
YGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG
CCCCCCCCHHHHHHHHEEECCCCEECEECCCCCEEEEECCCCCHHHHHHHHEEEEEEECC
YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAE
CHHHCCHHHHCCCCCCHHHHHCCEEEEEEECCCCEEEECCCEEECCCCCCCCCHHCCCEE
VRIDDKYGYINAKNEIIIEPEFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN
EEEECCCCEEECCCEEEEECCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA