| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475710
Identifier: 113475710
GI number: 113475710
Start: 3209480
End: 3210550
Strand: Direct
Name: 113475710
Synonym: Tery_2057
Alternate gene names: NA
Gene position: 3209480-3210550 (Clockwise)
Preceding gene: 113475709
Following gene: 113475711
Centisome position: 41.41
GC content: 35.39
Gene sequence:
>1071_bases ATGAAGCGCTCTCTATTTTTATTTATAAGTTTAGCTGTTTTAAGTTTAACATCCTGTAGCGCTGCCAAGGAAGTTCAGGA ATTAATTCAGGAATTAATTGATCCCACGCCACCACAGACATCGACCACATCTCCTGTTAAACAAAAAGAACAAAGAAAGT TATTTCCAATTCAGCAAAAAGGAAAATATGGTTATATCAATAAAATGGGCAAAATATTGATTCCACCAAAATTTGAACAG GTGAAAAATTTCTCAGAGGGATTAGCAGCAGTAAAAATTGGAGAAAAATGGGGTTATATTAATGAAATGGGAAAAATAGT CATCAGCCCAAAATTTGATTCTGCTTTACGTTTTTCCCAAGGGTTAGCACCAGTGAAAAAAGTTGCTCAAAGATGGAGCT ATATTAACCAGAATGGAGAAATAGTAATTCAACCAGAGTTTGAAGATGCAGTCTATTTTTCCGAAGGGTTAGCACGAGTT ACAATTGATGGTAACTGGGGTTATGTTGATAGAATGGGCAAAATAGTAATCAAATCAAAATATGGAGGACAAACTGGGCG GGGTTTTTTTGTTGAGGGATTAGCTGCTGTGAGGGTCGGGGCTGGCTATAAATATGGATATATAGATCAGGCTGGAGAAA TGGTCATTACAGAACAATATAATTTTGCTGGAGACTTTGTTAATGGTTTAGCGAGGGTTCAAATTTTTGATGTTTGGGGG TATATTGATAAAACTGGTAGAGAAGTCATTAGACCAAACTTTGAATTTAGTCAAGATTTTTCTGAGGGTTTAGCAGCAGT TAAAATTAAAGATAAGTATGGCTATATTGATGTTTCCGGAAAAAGAGTTATTCAACCGAAGTATGATTATGCTGGCAGTT TTTCTGAAGGTCTAGCAGAAGTAAGGATAGATGACAAATATGGCTACATTAATGCTAAGAATGAGATCATTATTGAGCCG GAGTTTGATAATGCTTTTGCTTTTTCTAATGGTATTGCAGAAGTGTGGGTAGATGACAAAAAGGGTTACATAGATAAAAT TGGTAGGTTTGTCTGGAATTTAAGTAATTGA
Upstream 100 bases:
>100_bases CGACTCTCCTACGGAAAAATTAGTCAGAGATTACTTTTGACTTTTGACTTTCCAATAGGGGATAATTTGTGAGTTAAAAA CTGGAGGAAAATTTTATCAA
Downstream 100 bases:
>100_bases TAGCGCTTATATAGCAACTATCATACTGGAGGGTACAAAGTTGTATCTGGCGCGAGAGTAGGGATCAGGTAGGGATGTGG CAAGTGCTAGCACAAGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: KWG Repeat Protein; KWG Repeat-Containing Protein; Kwg Repeat Protein; Serine/Threonine Protein Kinase; KWG Leptospira; TPR Repeat-Containing Protein; Lipoprotein; Kwg Leptospira Repeat Protein; KWG Protein; Phospholipase A; KWG Leptospira Repeat-Containing Protein; KWG Leptospira Family Protein; KWG Leptospira Family
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQKGKYGYINKMGKILIPPKFEQ VKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQGLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARV TIDGNWGYVDRMGKIVIKSKYGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAEVRIDDKYGYINAKNEIIIEP EFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN
Sequences:
>Translated_356_residues MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQKGKYGYINKMGKILIPPKFEQ VKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQGLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARV TIDGNWGYVDRMGKIVIKSKYGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAEVRIDDKYGYINAKNEIIIEP EFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN >Mature_356_residues MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQKGKYGYINKMGKILIPPKFEQ VKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQGLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARV TIDGNWGYVDRMGKIVIKSKYGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAEVRIDDKYGYINAKNEIIIEP EFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40075; Mature: 40075
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQK CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC GKYGYINKMGKILIPPKFEQVKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQ CCCCCHHCCCCEECCCCHHHHHHHHCCCEEEEECCCCCCHHHCCCEEECCCCCHHHHHHC GLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARVTIDGNWGYVDRMGKIVIKSK CCHHHHHHHHHHHHCCCCCCEEEEECCCCHHEECCCEEEEEECCCCCCHHCCCEEEEEEC YGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG CCCCCCCCHHHHHHHHEEECCCCEECEECCCCCEEEEECCCCCHHHHHHHHEEEEEEECC YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAE CHHHCCHHHHCCCCCCHHHHHCCEEEEEEECCCCEEEECCCEEECCCCCCCCCHHCCCEE VRIDDKYGYINAKNEIIIEPEFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN EEEECCCCEEECCCEEEEECCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKRSLFLFISLAVLSLTSCSAAKEVQELIQELIDPTPPQTSTTSPVKQKEQRKLFPIQQK CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC GKYGYINKMGKILIPPKFEQVKNFSEGLAAVKIGEKWGYINEMGKIVISPKFDSALRFSQ CCCCCHHCCCCEECCCCHHHHHHHHCCCEEEEECCCCCCHHHCCCEEECCCCCHHHHHHC GLAPVKKVAQRWSYINQNGEIVIQPEFEDAVYFSEGLARVTIDGNWGYVDRMGKIVIKSK CCHHHHHHHHHHHHCCCCCCEEEEECCCCHHEECCCEEEEEECCCCCCHHCCCEEEEEEC YGGQTGRGFFVEGLAAVRVGAGYKYGYIDQAGEMVITEQYNFAGDFVNGLARVQIFDVWG CCCCCCCCHHHHHHHHEEECCCCEECEECCCCCEEEEECCCCCHHHHHHHHEEEEEEECC YIDKTGREVIRPNFEFSQDFSEGLAAVKIKDKYGYIDVSGKRVIQPKYDYAGSFSEGLAE CHHHCCHHHHCCCCCCHHHHHCCEEEEEEECCCCEEEECCCEEECCCCCCCCCHHCCCEE VRIDDKYGYINAKNEIIIEPEFDNAFAFSNGIAEVWVDDKKGYIDKIGRFVWNLSN EEEECCCCEEECCCEEEEECCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA