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The map label for this gene is 113475467

Identifier: 113475467

GI number: 113475467

Start: 2742065

End: 2743078

Strand: Direct

Name: 113475467

Synonym: Tery_1796

Alternate gene names: NA

Gene position: 2742065-2743078 (Clockwise)

Preceding gene: 113475463

Following gene: 113475471

Centisome position: 35.38

GC content: 40.43

Gene sequence:

>1014_bases
ATGGCTTTTCGTATTTTATGCTTAGATGGTGGTGGTATTAGAGGTATTATGCCTGCCCGTATTCTTCAAAAAGTTGAGGA
ACGATTAGGTGGCCCTTTAAAAGATCATTTTGATCTAATAGCTGGTACTTCAACAGGATCAATATTAGCTGTAGGAATTG
GACTCGGAAAAAGCCCTGAAGAAATGTTAAATCTATATCTGGAGAAAGGTTTGCAAATATTCCCCTATCAATCTCTCTTC
TCACTTAAACGACTACCAATCATTTTCAAATATGGTCTTTCTGCTCCCAAGTTTTCCCACGAAGGCTTAATGGGGGTACT
TCAGGAGCAATTTGGAGAAAATAAATTTTCTGACATTACATCCGATCCTAATAAATTGATGGGCTCGTTAAAAATTCTTG
TTCCTAGCTATGATACCATTAGCCGTAATCCTGTAATATTTAAAAGCTGGGACCATGATCGCTGGTATTCTAAAGTTCCA
CTCTGGGAAATTTGTCTCTCTTCTGCCTCAGCCCCAACTTATTTTCCGGCCCACCGTATCAAATATGATGGGCGAGTTTA
CTCATTAATTGATGGAGGGGTTTGTGCTAATAATCCTGTTGCCTGTGCTGTGGCAGAGGCTATCAAGCTATTACGTCAGT
ATTTGGATCAATCTACAGGAGACTCTATTGAGCAGATTAAAGTAATATCTATTGGTACTGGAGATCCCGCATCTCCAATT
CCCTGGGAAAAAGTACGAGGTTGGGGACTGGTCCAATGGGGTTTGCGTATTGCAGATGTATTTATGGATGCTCCCCCTGA
TATACATCGATATGTTGCCGAACAAATCATAGGTGGAATGGATACTGACAGAGAAAAACGCTATCTTCGTCTACAACTAC
CTCTCAAGGACCCATTACTAGCAATAGATGATGCTCGGCAAGCCAACTTAGAGAGAATCTTAGAGGCAACAGATGCCTAC
ATTAATCAGGGAAAAGTACGAAAACAGTTAGAAACATTATTGGCTAATTGGTAG

Upstream 100 bases:

>100_bases
TTAAACTTTATTAATAAGCTTAAATATAAAGTGAATTTTAGGATTACTATTTACTTTACATTTTTAGTATCACAAAATCA
AACCCTGGAGGTAATAAACT

Downstream 100 bases:

>100_bases
CTTTTATTGCTGAAGTTAAAAATTTAAAGTTAAAGCTAAAATTTAAACTTATGCCTTGATATTGAAGCCGTTTTGGGGTT
AATGGGGTATAAATTTTGAC

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Phospholipase Patatin Family; Patatin-Related Protein; Patatin-Like Protein; Patatin-Like Phospholipase Family; Patatin Family Phospholipase; Phospholipase

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MAFRILCLDGGGIRGIMPARILQKVEERLGGPLKDHFDLIAGTSTGSILAVGIGLGKSPEEMLNLYLEKGLQIFPYQSLF
SLKRLPIIFKYGLSAPKFSHEGLMGVLQEQFGENKFSDITSDPNKLMGSLKILVPSYDTISRNPVIFKSWDHDRWYSKVP
LWEICLSSASAPTYFPAHRIKYDGRVYSLIDGGVCANNPVACAVAEAIKLLRQYLDQSTGDSIEQIKVISIGTGDPASPI
PWEKVRGWGLVQWGLRIADVFMDAPPDIHRYVAEQIIGGMDTDREKRYLRLQLPLKDPLLAIDDARQANLERILEATDAY
INQGKVRKQLETLLANW

Sequences:

>Translated_337_residues
MAFRILCLDGGGIRGIMPARILQKVEERLGGPLKDHFDLIAGTSTGSILAVGIGLGKSPEEMLNLYLEKGLQIFPYQSLF
SLKRLPIIFKYGLSAPKFSHEGLMGVLQEQFGENKFSDITSDPNKLMGSLKILVPSYDTISRNPVIFKSWDHDRWYSKVP
LWEICLSSASAPTYFPAHRIKYDGRVYSLIDGGVCANNPVACAVAEAIKLLRQYLDQSTGDSIEQIKVISIGTGDPASPI
PWEKVRGWGLVQWGLRIADVFMDAPPDIHRYVAEQIIGGMDTDREKRYLRLQLPLKDPLLAIDDARQANLERILEATDAY
INQGKVRKQLETLLANW
>Mature_336_residues
AFRILCLDGGGIRGIMPARILQKVEERLGGPLKDHFDLIAGTSTGSILAVGIGLGKSPEEMLNLYLEKGLQIFPYQSLFS
LKRLPIIFKYGLSAPKFSHEGLMGVLQEQFGENKFSDITSDPNKLMGSLKILVPSYDTISRNPVIFKSWDHDRWYSKVPL
WEICLSSASAPTYFPAHRIKYDGRVYSLIDGGVCANNPVACAVAEAIKLLRQYLDQSTGDSIEQIKVISIGTGDPASPIP
WEKVRGWGLVQWGLRIADVFMDAPPDIHRYVAEQIIGGMDTDREKRYLRLQLPLKDPLLAIDDARQANLERILEATDAYI
NQGKVRKQLETLLANW

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI52486194, Length=371, Percent_Identity=27.2237196765499, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI52486251, Length=371, Percent_Identity=27.2237196765499, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI48525351, Length=213, Percent_Identity=26.7605633802817, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544092, Length=349, Percent_Identity=29.2263610315186, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17541042, Length=245, Percent_Identity=31.4285714285714, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17551040, Length=239, Percent_Identity=25.1046025104602, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45551543, Length=250, Percent_Identity=31.6, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45551542, Length=250, Percent_Identity=31.6, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45551541, Length=250, Percent_Identity=31.6, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45550585, Length=250, Percent_Identity=31.6, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37660; Mature: 37529

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRILCLDGGGIRGIMPARILQKVEERLGGPLKDHFDLIAGTSTGSILAVGIGLGKSPE
CEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHEECCCCCCEEEEEECCCCCHH
EMLNLYLEKGLQIFPYQSLFSLKRLPIIFKYGLSAPKFSHEGLMGVLQEQFGENKFSDIT
HHHHHHHHCCCEECCCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHCC
SDPNKLMGSLKILVPSYDTISRNPVIFKSWDHDRWYSKVPLWEICLSSASAPTYFPAHRI
CCHHHHHCEEEEEECCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCCCCCCHHHE
KYDGRVYSLIDGGVCANNPVACAVAEAIKLLRQYLDQSTGDSIEQIKVISIGTGDPASPI
EECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
PWEKVRGWGLVQWGLRIADVFMDAPPDIHRYVAEQIIGGMDTDREKRYLRLQLPLKDPLL
CHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCE
AIDDARQANLERILEATDAYINQGKVRKQLETLLANW
EECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFRILCLDGGGIRGIMPARILQKVEERLGGPLKDHFDLIAGTSTGSILAVGIGLGKSPE
EEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHEECCCCCCEEEEEECCCCCHH
EMLNLYLEKGLQIFPYQSLFSLKRLPIIFKYGLSAPKFSHEGLMGVLQEQFGENKFSDIT
HHHHHHHHCCCEECCCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHCC
SDPNKLMGSLKILVPSYDTISRNPVIFKSWDHDRWYSKVPLWEICLSSASAPTYFPAHRI
CCHHHHHCEEEEEECCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCCCCCCHHHE
KYDGRVYSLIDGGVCANNPVACAVAEAIKLLRQYLDQSTGDSIEQIKVISIGTGDPASPI
EECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
PWEKVRGWGLVQWGLRIADVFMDAPPDIHRYVAEQIIGGMDTDREKRYLRLQLPLKDPLL
CHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCE
AIDDARQANLERILEATDAYINQGKVRKQLETLLANW
EECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA