Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475471

Identifier: 113475471

GI number: 113475471

Start: 2748048

End: 2748356

Strand: Direct

Name: 113475471

Synonym: Tery_1800

Alternate gene names: NA

Gene position: 2748048-2748356 (Clockwise)

Preceding gene: 113475467

Following gene: 113475476

Centisome position: 35.46

GC content: 37.54

Gene sequence:

>309_bases
ATGAAGGGCGAAGAATTATATCAATTATTATTCGAAAAGTGGGGTAAGTCTTATGATGTTCAAATACGGCGGATAAAGGA
CAAAATATTTGTGCAGGTGATGTGGAAGTATTTGGAACAAGCATCCTTTCCTATGACAGAACCAGAATATTTAGCTCACT
TAGATGATATAGCTACCTATATCAGTGGTTTTGGTAGCGTAGAAACTGTCAGGAATTATATTGAAAATACAAAGGAAAGA
CCAAGACTAGGCAAGGCCGTTAGTATTCCTTTAGATCTAGGCGAGAGAGCATCAGAATGGATGTTGTAG

Upstream 100 bases:

>100_bases
TGTAAACAAAAGGATTTTGAATTAATAGAAAAAACATATTATTATATCACAATAAAACTGTGATATAAACTAAACTCAAT
AGAAAATCTTAGGTGTGGAT

Downstream 100 bases:

>100_bases
TGCTAACCAGAACTCAGAAGTCAAAAGTAATTCTTGAGTAAATTTGAGGGTTTATAAATGTCCCCACCCTATCTGCGTAG
TGCGATAAAAAAATTCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKGEELYQLLFEKWGKSYDVQIRRIKDKIFVQVMWKYLEQASFPMTEPEYLAHLDDIATYISGFGSVETVRNYIENTKER
PRLGKAVSIPLDLGERASEWML

Sequences:

>Translated_102_residues
MKGEELYQLLFEKWGKSYDVQIRRIKDKIFVQVMWKYLEQASFPMTEPEYLAHLDDIATYISGFGSVETVRNYIENTKER
PRLGKAVSIPLDLGERASEWML
>Mature_102_residues
MKGEELYQLLFEKWGKSYDVQIRRIKDKIFVQVMWKYLEQASFPMTEPEYLAHLDDIATYISGFGSVETVRNYIENTKER
PRLGKAVSIPLDLGERASEWML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12037; Mature: 12037

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGEELYQLLFEKWGKSYDVQIRRIKDKIFVQVMWKYLEQASFPMTEPEYLAHLDDIATY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ISGFGSVETVRNYIENTKERPRLGKAVSIPLDLGERASEWML
HHCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHCCC
>Mature Secondary Structure
MKGEELYQLLFEKWGKSYDVQIRRIKDKIFVQVMWKYLEQASFPMTEPEYLAHLDDIATY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ISGFGSVETVRNYIENTKERPRLGKAVSIPLDLGERASEWML
HHCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA