| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is cysQ [H]
Identifier: 113475463
GI number: 113475463
Start: 2736273
End: 2737244
Strand: Direct
Name: cysQ [H]
Synonym: Tery_1792
Alternate gene names: 113475463
Gene position: 2736273-2737244 (Clockwise)
Preceding gene: 113475458
Following gene: 113475467
Centisome position: 35.31
GC content: 43.0
Gene sequence:
>972_bases ATGGCTTACGAACGCGAAAAACAAATAGCAATAGAATCTGCCCTAGCAGCAGCCAAACTCTGCGAACAGGTGCGTATCAA TATTCCCCCAGCAATGGAAAAGGGCGACAAAAGTCCTGTAACTGTTGCTGACTATGGTGCTCAGGCATTAATTTGTAAAG CTTTAGCTGAAGCTTTTCCCAATGATCCAGTGGTAGGAGAAGAAGATGCTACTGAGTTACAAACTCCGGAAATGGCAGAA AATTTGACAAAAGTGACAAATTATGTGCAAGAACAAATAACAAATGCTACTCCAGAACAGGTAGTACAGTGGATTAACCA AGGTAATGGTAAAGTTGGACCCCGTTATTGGACGTTAGACCCTATTGATGGCACGAAAGGGTTTTTACGTCAAGACCAAT ATGCAGTAGCTTTAGCATTAGTCGAAGAAGGAGAAGTTAAAGTCGGGGTGTTAGCTTGTCCTGCAATGCCAGTAGAAAAT AATCAACCAGGAATGTTATATGTAGCAGTAAGAGGTGAAGGTGCAGCAATGATGCCAATAGCAGGGGGCGAACTGACTCC CATTCAAGTTGTGCAGGCTGATGATACTGCTCATCTTCGGTTTGTTGAGAGCGTGGAAAGTTCTCACGGCGACCAAGACC GTCAGAATGCTGTAGCAAAAGCAGTAGGTATTACAGCAGCATCAGTTAGAGTAGACTCCCAAGCGAAATACGGTATCGTT GCATCTGGACAAGCTGCTTTGTATTTGCGCTTGCCCTCACCAAAGTCTCCAAATTACCGAGAAAATATTTGGGATCATGC TGCTGGTGCGATCGTAGTTGAGGAAGCAGGAGGGCGTGTTTCTGATATTCATGGCAAACCATTAAATTTTGCTGATGGCG CAAAGATGCTTGAGAACAGGGGTATAGTTGTTAGTAATAAAATAATTCATGACCAGGTTTTATCTATTTTAAAACAGCTT TCAGTTAAGTAG
Upstream 100 bases:
>100_bases GCCACATATTGTGATTTTTACACTATGGGCATCCGCAACGCAACAAAGCCTTTACCAAATATAATATATGCTATGAGGAG TACCCAAATCTAAACTACTC
Downstream 100 bases:
>100_bases ACATCAAGTAGGAATGTTGCATTCAACATTCCTACAGGTTTATCTTTTAACTGGGTAAAGCAATTAAATAATTATCACTC CCTAGGAGCTTGAGTAGAAA
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAYEREKQIAIESALAAAKLCEQVRINIPPAMEKGDKSPVTVADYGAQALICKALAEAFPNDPVVGEEDATELQTPEMAE NLTKVTNYVQEQITNATPEQVVQWINQGNGKVGPRYWTLDPIDGTKGFLRQDQYAVALALVEEGEVKVGVLACPAMPVEN NQPGMLYVAVRGEGAAMMPIAGGELTPIQVVQADDTAHLRFVESVESSHGDQDRQNAVAKAVGITAASVRVDSQAKYGIV ASGQAALYLRLPSPKSPNYRENIWDHAAGAIVVEEAGGRVSDIHGKPLNFADGAKMLENRGIVVSNKIIHDQVLSILKQL SVK
Sequences:
>Translated_323_residues MAYEREKQIAIESALAAAKLCEQVRINIPPAMEKGDKSPVTVADYGAQALICKALAEAFPNDPVVGEEDATELQTPEMAE NLTKVTNYVQEQITNATPEQVVQWINQGNGKVGPRYWTLDPIDGTKGFLRQDQYAVALALVEEGEVKVGVLACPAMPVEN NQPGMLYVAVRGEGAAMMPIAGGELTPIQVVQADDTAHLRFVESVESSHGDQDRQNAVAKAVGITAASVRVDSQAKYGIV ASGQAALYLRLPSPKSPNYRENIWDHAAGAIVVEEAGGRVSDIHGKPLNFADGAKMLENRGIVVSNKIIHDQVLSILKQL SVK >Mature_322_residues AYEREKQIAIESALAAAKLCEQVRINIPPAMEKGDKSPVTVADYGAQALICKALAEAFPNDPVVGEEDATELQTPEMAEN LTKVTNYVQEQITNATPEQVVQWINQGNGKVGPRYWTLDPIDGTKGFLRQDQYAVALALVEEGEVKVGVLACPAMPVENN QPGMLYVAVRGEGAAMMPIAGGELTPIQVVQADDTAHLRFVESVESSHGDQDRQNAVAKAVGITAASVRVDSQAKYGIVA SGQAALYLRLPSPKSPNYRENIWDHAAGAIVVEEAGGRVSDIHGKPLNFADGAKMLENRGIVVSNKIIHDQVLSILKQLS VK
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1790659, Length=275, Percent_Identity=29.4545454545455, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324508, Length=351, Percent_Identity=37.037037037037, Blast_Score=201, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 34678; Mature: 34547
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEREKQIAIESALAAAKLCEQVRINIPPAMEKGDKSPVTVADYGAQALICKALAEAFP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCC NDPVVGEEDATELQTPEMAENLTKVTNYVQEQITNATPEQVVQWINQGNGKVGPRYWTLD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEC PIDGTKGFLRQDQYAVALALVEEGEVKVGVLACPAMPVENNQPGMLYVAVRGEGAAMMPI CCCCCHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEE AGGELTPIQVVQADDTAHLRFVESVESSHGDQDRQNAVAKAVGITAASVRVDSQAKYGIV CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEE ASGQAALYLRLPSPKSPNYRENIWDHAAGAIVVEEAGGRVSDIHGKPLNFADGAKMLENR ECCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHCC GIVVSNKIIHDQVLSILKQLSVK CEEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYEREKQIAIESALAAAKLCEQVRINIPPAMEKGDKSPVTVADYGAQALICKALAEAFP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCC NDPVVGEEDATELQTPEMAENLTKVTNYVQEQITNATPEQVVQWINQGNGKVGPRYWTLD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEC PIDGTKGFLRQDQYAVALALVEEGEVKVGVLACPAMPVENNQPGMLYVAVRGEGAAMMPI CCCCCHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEE AGGELTPIQVVQADDTAHLRFVESVESSHGDQDRQNAVAKAVGITAASVRVDSQAKYGIV CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEE ASGQAALYLRLPSPKSPNYRENIWDHAAGAIVVEEAGGRVSDIHGKPLNFADGAKMLENR ECCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHCC GIVVSNKIIHDQVLSILKQLSVK CEEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]