Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475389

Identifier: 113475389

GI number: 113475389

Start: 2605416

End: 2605961

Strand: Direct

Name: 113475389

Synonym: Tery_1713

Alternate gene names: NA

Gene position: 2605416-2605961 (Clockwise)

Preceding gene: 113475388

Following gene: 113475390

Centisome position: 33.62

GC content: 29.67

Gene sequence:

>546_bases
ATGAAAGAAAATGTAGACGAACTGAAATTAGAAATAGATACTTTACATAGAGAAATAGATAGTTTACAAAGCCAAATAGA
GACACTTAGTCAAAAACGTTCCTCTTTCCAAATAAATATTAGCTTTCCTAAAGATAATACTCCTGAAGTACTAGCAGAAT
TTCGTCAAAAAAATATCGAAGAAGCTGCAAAGTGGCAAGGAGAAATTCAAAAAATTAATCAAGCTCTTAAAGTATTAAAG
CCACAACTTAATCAGAAAAAAATTACCCTACAAGAAAAAAAATATCGACTACAATACCTCGAATTACAACAGCAAGTTTA
CGAAGGAGCAAAAAATCTACAAGAACAAGTGCAAAAAGTCAACGAAAAAGCTAATCAACTTGAAGTCGAAATACAAAATC
TTAAACAAATTTGTCAACAATTAAATCCACTTTATCATCAATGGGTGAAAAACCCAGCCAATATAATGGATTTTAATGCC
ACAACCATCCCTTATGTTTATATTCAAGATAATAGCTTTGAATTAGGCAATAAAAATATTAAGTAA

Upstream 100 bases:

>100_bases
ATTGGTGGTATTGGGGTGAAACAAAAAACTTGGTATTGGGAAATCACACAACTGGATATATAGTAGTTCCTAAAAGATTA
GATTAAACCCTGCTAAAGTT

Downstream 100 bases:

>100_bases
ACTGCCATTACAATTTAAAATCTACTTATTTGCACTTATATGACATCCCTATAAATTTACAACAATATTGTAGTCATATC
CTAGGTTGGGTTAAGCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKENVDELKLEIDTLHREIDSLQSQIETLSQKRSSFQINISFPKDNTPEVLAEFRQKNIEEAAKWQGEIQKINQALKVLK
PQLNQKKITLQEKKYRLQYLELQQQVYEGAKNLQEQVQKVNEKANQLEVEIQNLKQICQQLNPLYHQWVKNPANIMDFNA
TTIPYVYIQDNSFELGNKNIK

Sequences:

>Translated_181_residues
MKENVDELKLEIDTLHREIDSLQSQIETLSQKRSSFQINISFPKDNTPEVLAEFRQKNIEEAAKWQGEIQKINQALKVLK
PQLNQKKITLQEKKYRLQYLELQQQVYEGAKNLQEQVQKVNEKANQLEVEIQNLKQICQQLNPLYHQWVKNPANIMDFNA
TTIPYVYIQDNSFELGNKNIK
>Mature_181_residues
MKENVDELKLEIDTLHREIDSLQSQIETLSQKRSSFQINISFPKDNTPEVLAEFRQKNIEEAAKWQGEIQKINQALKVLK
PQLNQKKITLQEKKYRLQYLELQQQVYEGAKNLQEQVQKVNEKANQLEVEIQNLKQICQQLNPLYHQWVKNPANIMDFNA
TTIPYVYIQDNSFELGNKNIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21370; Mature: 21370

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENVDELKLEIDTLHREIDSLQSQIETLSQKRSSFQINISFPKDNTPEVLAEFRQKNIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
EAAKWQGEIQKINQALKVLKPQLNQKKITLQEKKYRLQYLELQQQVYEGAKNLQEQVQKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEKANQLEVEIQNLKQICQQLNPLYHQWVKNPANIMDFNATTIPYVYIQDNSFELGNKNI
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCCEEEEEEEECCCEECCCCCC
K
C
>Mature Secondary Structure
MKENVDELKLEIDTLHREIDSLQSQIETLSQKRSSFQINISFPKDNTPEVLAEFRQKNIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
EAAKWQGEIQKINQALKVLKPQLNQKKITLQEKKYRLQYLELQQQVYEGAKNLQEQVQKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEKANQLEVEIQNLKQICQQLNPLYHQWVKNPANIMDFNATTIPYVYIQDNSFELGNKNI
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCCEEEEEEEECCCEECCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA