The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475369

Identifier: 113475369

GI number: 113475369

Start: 2568704

End: 2569144

Strand: Reverse

Name: 113475369

Synonym: Tery_1686

Alternate gene names: NA

Gene position: 2569144-2568704 (Counterclockwise)

Preceding gene: 113475371

Following gene: 113475367

Centisome position: 33.15

GC content: 40.82

Gene sequence:

>441_bases
ATGAATGCAACTAGCCAAGCAATTACCCCCGAACTAGCCAGTAAGATTGCTCACCTAGCTTTCCTTTTTCGAGCAGAATT
TTCTGGATCAACGGTTGATCTAAGTCCGTGGCTTACCGACGAACAAACTCAGTCTCAATTGGATCCTCACTCCATTGATT
TGAGCTTCTATTTGCCACAAAACCTCAGAGTCCTTGCATGTCAATGTGTTTTAATGGAGGTGAATTTTTCTCAAGATCTA
TTGCTGCCCACCTGCCAACTCCAAACTGTCCATGCATGTGGTTATATGTTGACACAGCAGCAGTGGCAGTTTTCTACAGA
AGATTGGACGTTTTTTGGCCTATCAACTCCTAATATTGAACATCAAGTACAATTCAAGAACCTAATTCATCACATTTTTG
AGTTATTCAAAAATCCGAATCAGGTGAAGACCTTTGAATAG

Upstream 100 bases:

>100_bases
TCTATGTGAGTTTATGAAGCATATTTATTAATTATATTATTGAAAAGTATTTCTATTAATAAAAAAAATTAGATTTAAGA
TTTAACTTGTATAAAGTTCT

Downstream 100 bases:

>100_bases
GGATGAATCTAGATAGAAGTTCAAAGTAAAAAAAATCTTAAATTATACCATTTCTCAAAAACTTTTCTAAGTTTTCTTGA
GTAGGGGATTCATCCCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNATSQAITPELASKIAHLAFLFRAEFSGSTVDLSPWLTDEQTQSQLDPHSIDLSFYLPQNLRVLACQCVLMEVNFSQDL
LLPTCQLQTVHACGYMLTQQQWQFSTEDWTFFGLSTPNIEHQVQFKNLIHHIFELFKNPNQVKTFE

Sequences:

>Translated_146_residues
MNATSQAITPELASKIAHLAFLFRAEFSGSTVDLSPWLTDEQTQSQLDPHSIDLSFYLPQNLRVLACQCVLMEVNFSQDL
LLPTCQLQTVHACGYMLTQQQWQFSTEDWTFFGLSTPNIEHQVQFKNLIHHIFELFKNPNQVKTFE
>Mature_146_residues
MNATSQAITPELASKIAHLAFLFRAEFSGSTVDLSPWLTDEQTQSQLDPHSIDLSFYLPQNLRVLACQCVLMEVNFSQDL
LLPTCQLQTVHACGYMLTQQQWQFSTEDWTFFGLSTPNIEHQVQFKNLIHHIFELFKNPNQVKTFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16809; Mature: 16809

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATSQAITPELASKIAHLAFLFRAEFSGSTVDLSPWLTDEQTQSQLDPHSIDLSFYLPQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCCEEEEEEECCC
NLRVLACQCVLMEVNFSQDLLLPTCQLQTVHACGYMLTQQQWQFSTEDWTFFGLSTPNIE
CCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
HQVQFKNLIHHIFELFKNPNQVKTFE
HHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNATSQAITPELASKIAHLAFLFRAEFSGSTVDLSPWLTDEQTQSQLDPHSIDLSFYLPQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCCEEEEEEECCC
NLRVLACQCVLMEVNFSQDLLLPTCQLQTVHACGYMLTQQQWQFSTEDWTFFGLSTPNIE
CCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
HQVQFKNLIHHIFELFKNPNQVKTFE
HHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA