Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475371

Identifier: 113475371

GI number: 113475371

Start: 2572077

End: 2572478

Strand: Reverse

Name: 113475371

Synonym: Tery_1689

Alternate gene names: NA

Gene position: 2572478-2572077 (Counterclockwise)

Preceding gene: 113475372

Following gene: 113475369

Centisome position: 33.19

GC content: 26.87

Gene sequence:

>402_bases
ATGTATGAAGTCTCCCAAATGAATCCAACTTTAGAATATATTTATAATCATCCAAAAGAAACAAAAAGAATTATTGGCAT
TACTTATGAACAGCTAATAAAATTAATAGCAAATGCCCAAATAATAGAATCAGAGAAAAAGGAGGCAATCGCCAAAACAG
AAAAAAGACTAATTAAAGCAGGTGGAGTCAGAAAAAAGAATTTAACAAAGGAAGAAGAAATAATTTTAACGTTATTTTAT
TTACATGAAATACCAAGTTTTCAAACATTAGGAATTAACTTTGGTATAAGTGAATCAAGTGCTAATAATATTTTTCATTA
CTGGATAGATATTTTCAGAAAATTACTGCCAGCAAGTTTATTAGAACAAGTAAAAAAAAAGAAAATGAATTGGAATGGGT
AA

Upstream 100 bases:

>100_bases
ATTGTTTTTGTTATCTTCTTTTCTACATATAGTAGGGTTCATACTAATATTAATAGACATCTCCAAAATAGAAAATAAGG
TAAAATTATCAAAACCATTT

Downstream 100 bases:

>100_bases
AGGAGATATTAACAGAATTAGAATTAATTGTAGATAGTACAGAACAAAGTAGAGAAAGACCAAGTGAATATAAAGACCAA
GAAAAATATTAAATATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MYEVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIANAQIIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY
LHEIPSFQTLGINFGISESSANNIFHYWIDIFRKLLPASLLEQVKKKKMNWNG

Sequences:

>Translated_133_residues
MYEVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIANAQIIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY
LHEIPSFQTLGINFGISESSANNIFHYWIDIFRKLLPASLLEQVKKKKMNWNG
>Mature_133_residues
MYEVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIANAQIIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY
LHEIPSFQTLGINFGISESSANNIFHYWIDIFRKLLPASLLEQVKKKKMNWNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15527; Mature: 15527

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIANAQIIESEKKEAIAKTEKRLIKA
CCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
GGVRKKNLTKEEEIILTLFYLHEIPSFQTLGINFGISESSANNIFHYWIDIFRKLLPASL
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHH
LEQVKKKKMNWNG
HHHHHHHCCCCCC
>Mature Secondary Structure
MYEVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIANAQIIESEKKEAIAKTEKRLIKA
CCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
GGVRKKNLTKEEEIILTLFYLHEIPSFQTLGINFGISESSANNIFHYWIDIFRKLLPASL
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHH
LEQVKKKKMNWNG
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA