Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475367

Identifier: 113475367

GI number: 113475367

Start: 2565521

End: 2565934

Strand: Reverse

Name: 113475367

Synonym: Tery_1684

Alternate gene names: NA

Gene position: 2565934-2565521 (Counterclockwise)

Preceding gene: 113475369

Following gene: 113475366

Centisome position: 33.11

GC content: 40.1

Gene sequence:

>414_bases
ATGAGCGATCGCGAGATACCAAAAATTGATAAAAAGGGTCTCAGGGAATTTGGTCTAATAGTAGGTGGTGTTTTTGGAGG
TTTATTCGGTCTATTACTACCGCTGCTCCACAAACATTGGCCTCTACCTGCATGGCCTTGGGTAATTGCTGTTCCTCTAT
TGGTACTGGCAGTTGTTTCACCACCGACTTTGGGACCTGTGTATAGGTTTTGGATGCGAGTGGGAATTTTCCTGAGTAAG
ATTATGACTCCTTTGTGGATGGGGTTAGTATTTTATCTTGTAGTTATGCCAATGGGTTTAATTATGCGAATGCTTAAAAA
AGACCCTATGGATCGACAATTTCATACTGAAATATCAAGTTATCGGGTAATGAGTCAATTAAAAAGTAAAGAGAGTATGG
AGCGACCTTTTTAA

Upstream 100 bases:

>100_bases
CTTCAGTTCTTAGCATCACAAAAAATAGATTTTTTTTGACTTTTAAAAGCTTTTATGATATTTTTACAGCATTAATCAAA
TCTTAATTATTAATAAATTA

Downstream 100 bases:

>100_bases
ATGTTTGAAGGAATATTAGACTTTCTCAAAGACCTTTGGGGTTTTATGAGAGAGCGAAAAAAATATTGGTTATTGCCTTT
GATTATTACTTTGGTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSDREIPKIDKKGLREFGLIVGGVFGGLFGLLLPLLHKHWPLPAWPWVIAVPLLVLAVVSPPTLGPVYRFWMRVGIFLSK
IMTPLWMGLVFYLVVMPMGLIMRMLKKDPMDRQFHTEISSYRVMSQLKSKESMERPF

Sequences:

>Translated_137_residues
MSDREIPKIDKKGLREFGLIVGGVFGGLFGLLLPLLHKHWPLPAWPWVIAVPLLVLAVVSPPTLGPVYRFWMRVGIFLSK
IMTPLWMGLVFYLVVMPMGLIMRMLKKDPMDRQFHTEISSYRVMSQLKSKESMERPF
>Mature_136_residues
SDREIPKIDKKGLREFGLIVGGVFGGLFGLLLPLLHKHWPLPAWPWVIAVPLLVLAVVSPPTLGPVYRFWMRVGIFLSKI
MTPLWMGLVFYLVVMPMGLIMRMLKKDPMDRQFHTEISSYRVMSQLKSKESMERPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15797; Mature: 15665

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDREIPKIDKKGLREFGLIVGGVFGGLFGLLLPLLHKHWPLPAWPWVIAVPLLVLAVVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
PPTLGPVYRFWMRVGIFLSKIMTPLWMGLVFYLVVMPMGLIMRMLKKDPMDRQFHTEISS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YRVMSQLKSKESMERPF
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDREIPKIDKKGLREFGLIVGGVFGGLFGLLLPLLHKHWPLPAWPWVIAVPLLVLAVVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
PPTLGPVYRFWMRVGIFLSKIMTPLWMGLVFYLVVMPMGLIMRMLKKDPMDRQFHTEISS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YRVMSQLKSKESMERPF
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA