| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475358
Identifier: 113475358
GI number: 113475358
Start: 2551876
End: 2552943
Strand: Direct
Name: 113475358
Synonym: Tery_1675
Alternate gene names: NA
Gene position: 2551876-2552943 (Clockwise)
Preceding gene: 113475355
Following gene: 113475368
Centisome position: 32.93
GC content: 29.78
Gene sequence:
>1068_bases ATGATGAAAAAGATTTTTTCTCTCCTCCGTCAAACAGTAATTATCTCTTTAATAACATTTGGATTCACAGAAGTTGTATT CAGAATTTACCACAAAATTAATCCTTCATTTATGTTTTATGACCCCTCATCTTATAATCGCTGGCGAGGAAAACCCTTGT CTACAGATTATGATTTTCAGTTAAATTCTAGGGGATTTAAAGATGTAGAATTTACCAAAGAAAAAGCAGAAGGTACATAT AGAATTATTGGTATAGGTGATTCTTTTGCCTATGGAGGTATTCCCTACAAACATAATTTTTTAACTCTATTGGAGTCTAA ACTAAATCAGGATAGTCAGCAATCTATAGAATTAATTAATATGGGAATAATTGCTATTGGACCGAAAGATTATTTATCCC TATTTGTCAATGAAGGATTAGAGTTAAATCCTGATATGCTTTTGTTATCTTTTTATATTGGTAATGACTTTTCTGATAAC TATAAATCAAAACAAGATAGGAAATTACTTACAGTTCAAAGTTCTTATGTTTTATCTTTCTTTGATTTTATGATTAAGGT GAATAGTAAGTTTGAAGGGAACCTCTATCATCATGGTATTGAATATCGAGAAGACTTACCTACTGTACCAGATGACTTTC ATTTACAAGAGGCTAAAAATAGAAGTTATATTTTTATCAAAAATCTTGAAAAAACAGATTTTCTAGAACATTTTAATGAT GCTTTTAGCGACTTATTAAAAATCAAGGAAATCTGCGATCGCCAAAATATTAATTTAGTCGTAGTCTTAATGCCTGATGA AGTACAAGTCATTAAACCACTCAGAGAAAAAGTAATTACTAATTACAATTTTTCTCCAGAACAATTTGATTTCCGACAAC CTAATAAATTACTATCTCAAGAACTGAATAAATACAATATATCTCATCTCGATCTTGTCGAAGAATTTGTTAATACTGGT TCCGAAACTGTTCTCTACAAACCCAATGATATTCATTGGAATATTGCTGGTAATAAATTAGCTGCAGAAGTAATATATAA GTATCTCTCTGGGAAAAAATTTCCCTAG
Upstream 100 bases:
>100_bases GCTAACAGTTATATGTTATATTAATCTCTTACTGATTAGTAATCTAGATTCACTTTGCTTAAATCAAGCAAAAATATTCA TCTCGCAAAACTAAAACTTA
Downstream 100 bases:
>100_bases TTTTCAGTAGATTATTTTATTCATTTTTACTATCTCCTAATTGATTTTCATTGGCAGTAAGTGTAGTAAAAATTGAATTG GCTATAAAATCTGACAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQLNSRGFKDVEFTKEKAEGTY RIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELINMGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDN YKSKQDRKLLTVQSSYVLSFFDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQELNKYNISHLDLVEEFVNTG SETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP
Sequences:
>Translated_355_residues MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQLNSRGFKDVEFTKEKAEGTY RIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELINMGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDN YKSKQDRKLLTVQSSYVLSFFDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQELNKYNISHLDLVEEFVNTG SETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP >Mature_355_residues MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQLNSRGFKDVEFTKEKAEGTY RIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELINMGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDN YKSKQDRKLLTVQSSYVLSFFDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQELNKYNISHLDLVEEFVNTG SETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41513; Mature: 41513
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEE LNSRGFKDVEFTKEKAEGTYRIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELIN ECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHE MGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDNYKSKQDRKLLTVQSSYVLSF ECEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHH FDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND HHHHHHCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHH AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQ HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH ELNKYNISHLDLVEEFVNTGSETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP HHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEE LNSRGFKDVEFTKEKAEGTYRIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELIN ECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHE MGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDNYKSKQDRKLLTVQSSYVLSF ECEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHH FDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND HHHHHHCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHH AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQ HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH ELNKYNISHLDLVEEFVNTGSETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP HHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA