| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475368
Identifier: 113475368
GI number: 113475368
Start: 2566422
End: 2567252
Strand: Direct
Name: 113475368
Synonym: Tery_1685
Alternate gene names: NA
Gene position: 2566422-2567252 (Clockwise)
Preceding gene: 113475358
Following gene: 113475370
Centisome position: 33.11
GC content: 35.38
Gene sequence:
>831_bases TTGAAAACAATTGAAAACGACCTGAGAACAATTGAACCTTATAAAACCTTTTTGAGCAAAAATAATGCTTACTGGATGGC AAGAATATCCGATCTTACTTATTGTTGTGGTCAAGATAGTAAACCAGATGAAGAAAAAATCATTGCAGATTTGAAGGCTG AAGATAAAAAGTTCATTTCTGTAACTGGAGAATCTAAAAATAGTTCTCAGGCTATTTTAGTTGAACATGAAGACTATCTT TGTATGGGTTTCCGTGGAACTGATGAATTAAAAGACTGGCTCGACAACATTAATGTGAAGAGGAAAAAGATGCTATTTGG TAAGTTTCATGCTGGTTTTGCTAATTCTCTGAAAGATGTATGGAAGCCATTGTTTAACAAATACCAGGAATTAAGACAGA AGAAAAAACGCCCTCTATTTTTGACTGGTCATAGTCTTGGCGGATCTATAGCTACTGTAGCAGCTGCAAGGCTAATTCAC CAAGATTTGCCTTTTATTTCTGTTTATACTTTTGGACAACCCCGTACTGTAGATCGTCGAACTGCACGTGTATTCAATGC AGAAGCAAAATCAAGGTTCTTCCGCTTTCATAATAATAATGATATAATTACTCGTGTTCCAAGTCGTACAGCGGGGTATA GTCATGTAGGTACCTGCGTTTATGTTACACAAGAAATTACACTGCATGTTGATCCTGGTTTCTGGTTTCGCTTTGTTGAT GGTATTGATGGTGTCGTTAATGATATATCAAAGTTAAGTATTGATTTTATAGCAGATCATGATATGGGTAAATATTTATC AGCAGTGAAAAGTTGGAATCTTATAACTTAG
Upstream 100 bases:
>100_bases TACTTTGATTTTTTGATTGTATTGTGATGATTAATACTTTATTATTTTATTAATTAAGTTATACTAGGTAGGTAATGTTT TTGATTAAAGGAATAAAGTT
Downstream 100 bases:
>100_bases AGTTAATTGTTAATAATATTGCCCTAACTAGGTAATAAGTTATAATTTTAGTGCTCTACCAATACCTGCTGCAATAATTA TTACGTATTTTGTTGCTATT
Product: lipase, class 3
Products: NA
Alternate protein names: Lipase Family Protein; Lipase Family
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFISVTGESKNSSQAILVEHEDYL CMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDVWKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIH QDLPFISVYTFGQPRTVDRRTARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT
Sequences:
>Translated_276_residues MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFISVTGESKNSSQAILVEHEDYL CMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDVWKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIH QDLPFISVYTFGQPRTVDRRTARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT >Mature_276_residues MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFISVTGESKNSSQAILVEHEDYL CMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDVWKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIH QDLPFISVYTFGQPRTVDRRTARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31664; Mature: 31664
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFIS CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHCCCCCCEEEE VTGESKNSSQAILVEHEDYLCMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDV EECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIHQDLPFISVYTFGQPRTVDRR HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH TARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD HHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHH GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT HHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCCC >Mature Secondary Structure MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFIS CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHCCCCCCEEEE VTGESKNSSQAILVEHEDYLCMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDV EECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIHQDLPFISVYTFGQPRTVDRR HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH TARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD HHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHH GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT HHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA