Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475368

Identifier: 113475368

GI number: 113475368

Start: 2566422

End: 2567252

Strand: Direct

Name: 113475368

Synonym: Tery_1685

Alternate gene names: NA

Gene position: 2566422-2567252 (Clockwise)

Preceding gene: 113475358

Following gene: 113475370

Centisome position: 33.11

GC content: 35.38

Gene sequence:

>831_bases
TTGAAAACAATTGAAAACGACCTGAGAACAATTGAACCTTATAAAACCTTTTTGAGCAAAAATAATGCTTACTGGATGGC
AAGAATATCCGATCTTACTTATTGTTGTGGTCAAGATAGTAAACCAGATGAAGAAAAAATCATTGCAGATTTGAAGGCTG
AAGATAAAAAGTTCATTTCTGTAACTGGAGAATCTAAAAATAGTTCTCAGGCTATTTTAGTTGAACATGAAGACTATCTT
TGTATGGGTTTCCGTGGAACTGATGAATTAAAAGACTGGCTCGACAACATTAATGTGAAGAGGAAAAAGATGCTATTTGG
TAAGTTTCATGCTGGTTTTGCTAATTCTCTGAAAGATGTATGGAAGCCATTGTTTAACAAATACCAGGAATTAAGACAGA
AGAAAAAACGCCCTCTATTTTTGACTGGTCATAGTCTTGGCGGATCTATAGCTACTGTAGCAGCTGCAAGGCTAATTCAC
CAAGATTTGCCTTTTATTTCTGTTTATACTTTTGGACAACCCCGTACTGTAGATCGTCGAACTGCACGTGTATTCAATGC
AGAAGCAAAATCAAGGTTCTTCCGCTTTCATAATAATAATGATATAATTACTCGTGTTCCAAGTCGTACAGCGGGGTATA
GTCATGTAGGTACCTGCGTTTATGTTACACAAGAAATTACACTGCATGTTGATCCTGGTTTCTGGTTTCGCTTTGTTGAT
GGTATTGATGGTGTCGTTAATGATATATCAAAGTTAAGTATTGATTTTATAGCAGATCATGATATGGGTAAATATTTATC
AGCAGTGAAAAGTTGGAATCTTATAACTTAG

Upstream 100 bases:

>100_bases
TACTTTGATTTTTTGATTGTATTGTGATGATTAATACTTTATTATTTTATTAATTAAGTTATACTAGGTAGGTAATGTTT
TTGATTAAAGGAATAAAGTT

Downstream 100 bases:

>100_bases
AGTTAATTGTTAATAATATTGCCCTAACTAGGTAATAAGTTATAATTTTAGTGCTCTACCAATACCTGCTGCAATAATTA
TTACGTATTTTGTTGCTATT

Product: lipase, class 3

Products: NA

Alternate protein names: Lipase Family Protein; Lipase Family

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFISVTGESKNSSQAILVEHEDYL
CMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDVWKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIH
QDLPFISVYTFGQPRTVDRRTARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD
GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT

Sequences:

>Translated_276_residues
MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFISVTGESKNSSQAILVEHEDYL
CMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDVWKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIH
QDLPFISVYTFGQPRTVDRRTARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD
GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT
>Mature_276_residues
MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFISVTGESKNSSQAILVEHEDYL
CMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDVWKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIH
QDLPFISVYTFGQPRTVDRRTARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD
GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31664; Mature: 31664

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFIS
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHCCCCCCEEEE
VTGESKNSSQAILVEHEDYLCMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDV
EECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
WKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIHQDLPFISVYTFGQPRTVDRR
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH
TARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD
HHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHH
GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTIENDLRTIEPYKTFLSKNNAYWMARISDLTYCCGQDSKPDEEKIIADLKAEDKKFIS
CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHCCCCCCEEEE
VTGESKNSSQAILVEHEDYLCMGFRGTDELKDWLDNINVKRKKMLFGKFHAGFANSLKDV
EECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
WKPLFNKYQELRQKKKRPLFLTGHSLGGSIATVAAARLIHQDLPFISVYTFGQPRTVDRR
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH
TARVFNAEAKSRFFRFHNNNDIITRVPSRTAGYSHVGTCVYVTQEITLHVDPGFWFRFVD
HHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHH
GIDGVVNDISKLSIDFIADHDMGKYLSAVKSWNLIT
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA