The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475348

Identifier: 113475348

GI number: 113475348

Start: 2531396

End: 2532139

Strand: Reverse

Name: 113475348

Synonym: Tery_1665

Alternate gene names: NA

Gene position: 2532139-2531396 (Counterclockwise)

Preceding gene: 113475349

Following gene: 113475347

Centisome position: 32.67

GC content: 33.33

Gene sequence:

>744_bases
ATGTCTAAAATTCCAGATGTATTGTGGTTAAATACTAGCCCGAGTCTAAAAGTTTTTAATCAGCGATTAATTCGTTACTT
ATCGAGAAAAATTTTAATTGCAGAATGGGATTATTTGCAAACTCCCGACGAACCTTGTCTTCTTGATATAGCTGTAACTT
TACTTCATGATTATCTCAAATCTATAAATAGACCTATTCATCTTATTGGTCATAGTACAAGTGGATTAGTAGGATTAATG
TATGCTCGTAAATATCCAGAAAGAGTCAAATCTTTAACCTTATTATCTGTAGGTGTTCATCCCACAGTTGATTGGCAAGC
ACATTATTATGTACATCGTTATCTTTTACCTTGTAGTCGTGAAATAATTTTGAGGAATATGGTAAAAAGTTTATTTGGTG
AACAAGGTAAAAAAATTACTCAAAATTTAGTGAAAATATTGGAGAGAGATTTAGATTTATCTCCATCCCCTCATTCATTA
TTAAAACGCCAAAGTATGGTTCCAAGAGAATCTCCTGTACCTTTAATGGTATGTGGCAGCTACGATGATACAATTGTTGA
TCCTAATTTAATTCAAGGATGGCAACCGTTTTTAAAACCAGAAGATCGCATTTGGGAATGCCCTGAAGGTGGTTATTTTT
TCCATCATTTTTCACCTCTAAATGTAGGACAACCACTTCTAGAATTTTGGCAAGAAAATAGCCTGGTTTCATCAAATATC
ACTCCACAAGCAATAGCAAGTTAA

Upstream 100 bases:

>100_bases
TTTATACTTCTGATTTCAGACACTTCCTTCTCCAAAAATTATTTTTTACTCAAAGGTACTATTTATTAGTACCTTAATAA
CCTAGGAGAACAGAAAAGCA

Downstream 100 bases:

>100_bases
ATGTTCTATTAGAGCCCTTCAAAAAAGCTTCTCAAAGCCTTATGTCCTGTTAAAATTATAGTCTATTATAAACATTCAGC
TAGCTCCCAGTCATCTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSKIPDVLWLNTSPSLKVFNQRLIRYLSRKILIAEWDYLQTPDEPCLLDIAVTLLHDYLKSINRPIHLIGHSTSGLVGLM
YARKYPERVKSLTLLSVGVHPTVDWQAHYYVHRYLLPCSREIILRNMVKSLFGEQGKKITQNLVKILERDLDLSPSPHSL
LKRQSMVPRESPVPLMVCGSYDDTIVDPNLIQGWQPFLKPEDRIWECPEGGYFFHHFSPLNVGQPLLEFWQENSLVSSNI
TPQAIAS

Sequences:

>Translated_247_residues
MSKIPDVLWLNTSPSLKVFNQRLIRYLSRKILIAEWDYLQTPDEPCLLDIAVTLLHDYLKSINRPIHLIGHSTSGLVGLM
YARKYPERVKSLTLLSVGVHPTVDWQAHYYVHRYLLPCSREIILRNMVKSLFGEQGKKITQNLVKILERDLDLSPSPHSL
LKRQSMVPRESPVPLMVCGSYDDTIVDPNLIQGWQPFLKPEDRIWECPEGGYFFHHFSPLNVGQPLLEFWQENSLVSSNI
TPQAIAS
>Mature_246_residues
SKIPDVLWLNTSPSLKVFNQRLIRYLSRKILIAEWDYLQTPDEPCLLDIAVTLLHDYLKSINRPIHLIGHSTSGLVGLMY
ARKYPERVKSLTLLSVGVHPTVDWQAHYYVHRYLLPCSREIILRNMVKSLFGEQGKKITQNLVKILERDLDLSPSPHSLL
KRQSMVPRESPVPLMVCGSYDDTIVDPNLIQGWQPFLKPEDRIWECPEGGYFFHHFSPLNVGQPLLEFWQENSLVSSNIT
PQAIAS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Anabaena PCC 7120 alr2406 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28427; Mature: 28296

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIPDVLWLNTSPSLKVFNQRLIRYLSRKILIAEWDYLQTPDEPCLLDIAVTLLHDYLK
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
SINRPIHLIGHSTSGLVGLMYARKYPERVKSLTLLSVGVHPTVDWQAHYYVHRYLLPCSR
HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEHEEECCCCCCCCHHHHHHHHHHCCCHH
EIILRNMVKSLFGEQGKKITQNLVKILERDLDLSPSPHSLLKRQSMVPRESPVPLMVCGS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECC
YDDTIVDPNLIQGWQPFLKPEDRIWECPEGGYFFHHFSPLNVGQPLLEFWQENSLVSSNI
CCCCCCCCHHHHCCCHHCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHCCCEECCCC
TPQAIAS
CHHHHCC
>Mature Secondary Structure 
SKIPDVLWLNTSPSLKVFNQRLIRYLSRKILIAEWDYLQTPDEPCLLDIAVTLLHDYLK
CCCCCEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
SINRPIHLIGHSTSGLVGLMYARKYPERVKSLTLLSVGVHPTVDWQAHYYVHRYLLPCSR
HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEHEEECCCCCCCCHHHHHHHHHHCCCHH
EIILRNMVKSLFGEQGKKITQNLVKILERDLDLSPSPHSLLKRQSMVPRESPVPLMVCGS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECC
YDDTIVDPNLIQGWQPFLKPEDRIWECPEGGYFFHHFSPLNVGQPLLEFWQENSLVSSNI
CCCCCCCCHHHHCCCHHCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHCCCEECCCC
TPQAIAS
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]