| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is fld
Identifier: 113475349
GI number: 113475349
Start: 2532407
End: 2532922
Strand: Reverse
Name: fld
Synonym: Tery_1666
Alternate gene names: 113475349
Gene position: 2532922-2532407 (Counterclockwise)
Preceding gene: 113475350
Following gene: 113475348
Centisome position: 32.68
GC content: 38.57
Gene sequence:
>516_bases ATGTCAAAAATTGGTCTTTTTGTCGGTACCACAACAGGTAAAACTGAAGAAGCTGCAGAAAAGATTAAGGAGGAATTTGG TGGTGACGATGTAGTTACTATCCATGACATATCCGAGGCAAGTCCCGAAGATTTTGATGGTTATCAAAATGTAATTATTG GTTGTCCTACTTGGGATGTTGGTGAACTACAAAGTGACTGGAGTGGTTTCTATAGTGAAGAACTAGATAATGTAAAATTC ACCGGCAAAAAAGTGGCCTATTTTGGTACAGGTGATCAAATAGGATATGCTGATAATTTTCAGGATGCCATGGGTATTTT GGAGGAAAAAATCACTGGGCTTGGAGGTACTACTATTGGGTCTTGGTCTACAGAGGGTTATGATCATGAAGATTCCAAAG CAGTCAAAAATGGCAAGTTTGTAGGTTTAGCTCTAGATGATGATAATCAAGCCGATTTAACAGATGAACGGATCAAAGAA TGGGTAAAGCAACTGAAAACAGAATTTGGGGTTTAG
Upstream 100 bases:
>100_bases TAAATTATTCAAAGACATTCTTTTTTTTAAACATATTAGAATATGATAAGCTAAAATCTTACGTATTAAGACAAAAAAAA CTACTACTACGGAGGTAAAA
Downstream 100 bases:
>100_bases TCTGGTTGAATCAGCAAAATTCTCAGATTTGACTAAGGTTGATTAAATCAGAGAAATTCCTTTAACGTTCAAAACTTCTA GGAGAAGGAAGCTTTCGGAG
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSKIGLFVGTTTGKTEEAAEKIKEEFGGDDVVTIHDISEASPEDFDGYQNVIIGCPTWDVGELQSDWSGFYSEELDNVKF TGKKVAYFGTGDQIGYADNFQDAMGILEEKITGLGGTTIGSWSTEGYDHEDSKAVKNGKFVGLALDDDNQADLTDERIKE WVKQLKTEFGV
Sequences:
>Translated_171_residues MSKIGLFVGTTTGKTEEAAEKIKEEFGGDDVVTIHDISEASPEDFDGYQNVIIGCPTWDVGELQSDWSGFYSEELDNVKF TGKKVAYFGTGDQIGYADNFQDAMGILEEKITGLGGTTIGSWSTEGYDHEDSKAVKNGKFVGLALDDDNQADLTDERIKE WVKQLKTEFGV >Mature_170_residues SKIGLFVGTTTGKTEEAAEKIKEEFGGDDVVTIHDISEASPEDFDGYQNVIIGCPTWDVGELQSDWSGFYSEELDNVKFT GKKVAYFGTGDQIGYADNFQDAMGILEEKITGLGGTTIGSWSTEGYDHEDSKAVKNGKFVGLALDDDNQADLTDERIKEW VKQLKTEFGV
Specific function: Low-potential electron donor to a number of redox enzymes
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain
Homologues:
Organism=Escherichia coli, GI1789262, Length=170, Percent_Identity=44.7058823529412, Blast_Score=147, Evalue=3e-37, Organism=Escherichia coli, GI1786900, Length=172, Percent_Identity=43.6046511627907, Blast_Score=145, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FLAV_TRIEI (O52659)
Other databases:
- EMBL: CP000393 - EMBL: AF044318 - RefSeq: YP_721410.1 - ProteinModelPortal: O52659 - SMR: O52659 - GeneID: 4245460 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_1666 - NMPDR: fig|203124.1.peg.1582 - eggNOG: COG0716 - HOGENOM: HBG686708 - OMA: DDKHFVG - PhylomeDB: O52659 - ProtClustDB: PRK09267 - BioCyc: TERY203124:TERY_1666-MONOMER - GO: GO:0006810 - InterPro: IPR008254 - InterPro: IPR010086 - TIGRFAMs: TIGR01752
Pfam domain/function: PF00258 Flavodoxin_1
EC number: NA
Molecular weight: Translated: 18742; Mature: 18610
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00201 FLAVODOXIN; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIGLFVGTTTGKTEEAAEKIKEEFGGDDVVTIHDISEASPEDFDGYQNVIIGCPTWDV CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCH GELQSDWSGFYSEELDNVKFTGKKVAYFGTGDQIGYADNFQDAMGILEEKITGLGGTTIG HHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC SWSTEGYDHEDSKAVKNGKFVGLALDDDNQADLTDERIKEWVKQLKTEFGV CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKIGLFVGTTTGKTEEAAEKIKEEFGGDDVVTIHDISEASPEDFDGYQNVIIGCPTWDV CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCH GELQSDWSGFYSEELDNVKFTGKKVAYFGTGDQIGYADNFQDAMGILEEKITGLGGTTIG HHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC SWSTEGYDHEDSKAVKNGKFVGLALDDDNQADLTDERIKEWVKQLKTEFGV CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA