| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475347
Identifier: 113475347
GI number: 113475347
Start: 2530383
End: 2530733
Strand: Reverse
Name: 113475347
Synonym: Tery_1664
Alternate gene names: NA
Gene position: 2530733-2530383 (Counterclockwise)
Preceding gene: 113475348
Following gene: 113475346
Centisome position: 32.65
GC content: 29.34
Gene sequence:
>351_bases ATGATTAATTTATTTCACCAAGAGATAGTTCAAAGCCTAGCTCATGTATTTTTTATGATTGGTATTATATCACTAATTAC TATTAGTTTGTATAATTTTTATTTGACGTTTCACTCAGGAATAAATTATGTAAAACGACTGCATCAAATTCCTTGTAGTC GCTGTACATTTTTCACAGGAGACTATCGTTTAAAATGTACTGTACATCCCTATAGCGCACTAACTGAAACAGCAATAAAT TGTAGGGATTATGAAGAAAACAATAATCAAAAAAAACCATTTTTACAAGTATTTAAAGCTAATTCACGACGATTTTATTC CCAAGCTAAAAATCCAGCAACTCACAATTAA
Upstream 100 bases:
>100_bases ACATATAATATAAGTGATCGCTTCAGTTTTTGGTTAGTTGTATTACTACCTCTAACTAGGATTTTTTCACTAAGTATTGA TTCAGTATAGAGTTGAAACT
Downstream 100 bases:
>100_bases TTTTCTCAAAAATAATTAGCTGAGAATTAATTGTTGCATGGCAAAAAAATGTCAGTCTTAAGCTATACTAAACGAATAAT TAATAAGTAGTAATTGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MINLFHQEIVQSLAHVFFMIGIISLITISLYNFYLTFHSGINYVKRLHQIPCSRCTFFTGDYRLKCTVHPYSALTETAIN CRDYEENNNQKKPFLQVFKANSRRFYSQAKNPATHN
Sequences:
>Translated_116_residues MINLFHQEIVQSLAHVFFMIGIISLITISLYNFYLTFHSGINYVKRLHQIPCSRCTFFTGDYRLKCTVHPYSALTETAIN CRDYEENNNQKKPFLQVFKANSRRFYSQAKNPATHN >Mature_116_residues MINLFHQEIVQSLAHVFFMIGIISLITISLYNFYLTFHSGINYVKRLHQIPCSRCTFFTGDYRLKCTVHPYSALTETAIN CRDYEENNNQKKPFLQVFKANSRRFYSQAKNPATHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13630; Mature: 13630
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLFHQEIVQSLAHVFFMIGIISLITISLYNFYLTFHSGINYVKRLHQIPCSRCTFFTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC DYRLKCTVHPYSALTETAINCRDYEENNNQKKPFLQVFKANSRRFYSQAKNPATHN CEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCC >Mature Secondary Structure MINLFHQEIVQSLAHVFFMIGIISLITISLYNFYLTFHSGINYVKRLHQIPCSRCTFFTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC DYRLKCTVHPYSALTETAINCRDYEENNNQKKPFLQVFKANSRRFYSQAKNPATHN CEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA