| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475311
Identifier: 113475311
GI number: 113475311
Start: 2473654
End: 2474316
Strand: Direct
Name: 113475311
Synonym: Tery_1620
Alternate gene names: NA
Gene position: 2473654-2474316 (Clockwise)
Preceding gene: 113475310
Following gene: 113475315
Centisome position: 31.92
GC content: 39.52
Gene sequence:
>663_bases ATGAAATTGGTTTATTTTTTAGCGGGAGTAGCATTGTTTATAACAGTGCTATTTATACCTAACCCAATGGGAGAATGGGA TAGAATACCTATTGTTGAATCAATAGTCGCGGATAGTGGAGTAGCTAATGCAGTTTCTGGCATCATTTTTAGAAATCGAC TTTATGACACGGTTTTTGAGGTGATAGTATTTACGATAGCTATCTTGGGTGTTCGTTTTTTATTGTCAGACGAAGAACCT ACCGATAATTTTTATAGATTAAGCGATCCCACATCCAGAGTTTTAGCACGTTTAGGAGCGACTATTGCGGCGATGGTGAG TATTGAGTTATCAATTCGGGGGCATCTGAGTCCGGGGGGTGGTTTTGCTGCAGGGATAGCAGGAGGAACTGCTATTGGTT TAGTTGCTATGACTTCATCACCGGATAAGATGGAAAAGATATATCAGAGATGGAATGCTGCTATCTGGGAAAAAGTTTCA GTTTTAGTATTCATAATATTGGCAGGGATAACTATGATGGGATGGGAATTACCTCAAGGAACATTAGGAGATTTATTTAG TGGAGGAATTGTTCCGATACTGAATTTTTTGGTGGCTATAAAAGTGGCATTGGGTTCGTGGGCGGTTATTTTATTGTTTA TTCGTTATCGGGGGTTGTTGTGA
Upstream 100 bases:
>100_bases CTAGAGTGTATCGTCTATTTGAAATTATGGAAAAGGAACTAACTTTATCAGAAACAACTGTGAGATATATAAATGTCAGT AACTTGGAGGAAAAAGATTA
Downstream 100 bases:
>100_bases GGGTGTGAGGTGGATGGAGTGATGGGATGATGGGGCGGTAGCATATAGTTTTTATAGTTTGATGGTTATAGTCATAAAAA TACTAATAATTTTGATTTTT
Product: putative monovalent cation/H+ antiporter subunit B
Products: NA
Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Related Protein; Na+/H+ Antiporter Family Domain Protein; Na+ Antiporter MnhB Subunit-Related Protein; Transporter CationProton Antiporter Family
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFEVIVFTIAILGVRFLLSDEEP TDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGGGFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVS VLVFIILAGITMMGWELPQGTLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL
Sequences:
>Translated_220_residues MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFEVIVFTIAILGVRFLLSDEEP TDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGGGFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVS VLVFIILAGITMMGWELPQGTLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL >Mature_220_residues MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFEVIVFTIAILGVRFLLSDEEP TDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGGGFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVS VLVFIILAGITMMGWELPQGTLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23822; Mature: 23822
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFE CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VIVFTIAILGVRFLLSDEEPTDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGG HHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC GFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVSVLVFIILAGITMMGWELPQG CEEHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFE CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VIVFTIAILGVRFLLSDEEPTDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGG HHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC GFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVSVLVFIILAGITMMGWELPQG CEEHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA