Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475310

Identifier: 113475310

GI number: 113475310

Start: 2473082

End: 2473654

Strand: Direct

Name: 113475310

Synonym: Tery_1619

Alternate gene names: NA

Gene position: 2473082-2473654 (Clockwise)

Preceding gene: 113475309

Following gene: 113475311

Centisome position: 31.91

GC content: 33.86

Gene sequence:

>573_bases
ATGAATGATATTGATATTGATATTTATGTTTATGTTATCATCGGGCTTTTACCATTGGCCGCCTTGATACTGGTACTTCA
AGTTAATCCTTATAATGGTCTTATTATCCGAGCCATTTTAGGAGAAATAGCAGCATTAGTTTATGCACTTTTGGGTGCTG
CGGATGTAGCTTTAACGGAAGCTTTAGTTGCAACAATGTTAGCTGTCAGCCTTTATGTGATTACAGTTCGTTCTTCTTTA
GTAATGCGTTTGGGAATACTTAAAGAAGTTGAGGCAGAAACAGAAAGTTATATGAAGGAAGTTGTCGATAATATGAGAAA
AATTATTGATAAATATCATTTGCGTTTGGAATTAGTCGAATATCCAACTCAACAAGCTTTAGAAGGAGGGTTACGATCCA
AAGAAGTTCATACTATTTTTGGCAAACCAGATGAATTAAAACTAGAGGGCAAACAAACTTATCAGACTACTACTAGAGTG
TATCGTCTATTTGAAATTATGGAAAAGGAACTAACTTTATCAGAAACAACTGTGAGATATATAAATGTCAGTAACTTGGA
GGAAAAAGATTAA

Upstream 100 bases:

>100_bases
TTTATAGCCGGGCTAAAGCCTAGGACAGAAAAAGGCTTATAGTAGCTCTTCTGGAGGATGCATATAATATTTCTTAATGA
TTATTTCTTGACTAATACCA

Downstream 100 bases:

>100_bases
TGAAATTGGTTTATTTTTTAGCGGGAGTAGCATTGTTTATAACAGTGCTATTTATACCTAACCCAATGGGAGAATGGGAT
AGAATACCTATTGTTGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTEALVATMLAVSLYVITVRSSL
VMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVEYPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRV
YRLFEIMEKELTLSETTVRYINVSNLEEKD

Sequences:

>Translated_190_residues
MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTEALVATMLAVSLYVITVRSSL
VMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVEYPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRV
YRLFEIMEKELTLSETTVRYINVSNLEEKD
>Mature_190_residues
MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTEALVATMLAVSLYVITVRSSL
VMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVEYPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRV
YRLFEIMEKELTLSETTVRYINVSNLEEKD

Specific function: Unknown

COG id: COG1563

COG function: function code P; Predicted subunit of the Multisubunit Na+/H+ antiporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21466; Mature: 21466

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVATMLAVSLYVITVRSSLVMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRVYRLFEIMEKELTLSETTVRY
CCHHHHHHCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
INVSNLEEKD
EECCCCCCCC
>Mature Secondary Structure
MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVATMLAVSLYVITVRSSLVMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRVYRLFEIMEKELTLSETTVRY
CCHHHHHHCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
INVSNLEEKD
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA