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The map label for this gene is ssuC [C]

Identifier: 113475315

GI number: 113475315

Start: 2483205

End: 2484062

Strand: Direct

Name: ssuC [C]

Synonym: Tery_1625

Alternate gene names: 113475315

Gene position: 2483205-2484062 (Clockwise)

Preceding gene: 113475311

Following gene: 113475317

Centisome position: 32.04

GC content: 31.47

Gene sequence:

>858_bases
ATGCCGAGTCTTATTACAAAAAATAATCTACAAAAATTAATACAAAAAAAATCACAAAATCGAATCCTAAATAAGCTATT
TTCGATTGATATAATTGCTCCTGTAATTTTAGGAATTATTGTATTACTCACATGGGAAATTTCGGTAGAGAAGATGAATA
TTCCTCCCTATTTACTGCCTGGACCGATATTAGTAATCAAGACTATGATTCAGGAATGGAATGCATTATTTATGTCTTTA
ATAACAACTATAAAAATTACAGTTGTTGCTTTGGTAGTAGCAGTAAGTTCTGGGGTATTGATTTCGATATTATTTGCTCA
GAATAAATTAATTGAAAGAAGCTTATTTCCTTATGCAGTAATTTTACAGACTACTCCTATTGTGGCTATCTCTCCTTTGA
TTATTATATGGCTCAGAGATAATACTTTTGGCGCATTAATTCTTTGTGCTTGGATTGTAGCATTTTTTCCAATTATTTCT
AATACAACTTTAGGATTAAATAGCGTTGATAAAAATTTGAGCGATATGTTTAAATTATATGGAGCTTCTCCTTGGCAAAC
TCTAATTTATTTGAGATTTCCTAGTGCTTTACCTTATTTTTTAGGAGGGTTAAGAATTAGTGGTGGTTTGGCATTAATTG
GGGCAGTAGTAGCTGAATTTGTGGCAGGTACTGGAGGCACTAGGTCTGGCATTGCTTATCAGATTTTAATGTCTAGTTAT
AATTTGCAAATTCCGAGAATGTTTGCTGCTTTATTCTTGACGACAGGTTTAGGGATAGCTATTTTTGTATTTTTCACAGT
TTTATCAGATTATTTGTTAAAAGATTGGCATGAAAGTGCGGTAAAAAAAGATAGTTAA

Upstream 100 bases:

>100_bases
CTATTTTAATTTTCTGCGCTTTTTAGAAGGCAAATAATTCAGGATTTAAAATGTGTAATTAATTTTCCATGACCACTTAA
CTAGAATTAATTTTTAAACT

Downstream 100 bases:

>100_bases
TATTAAATTTAGTTTGTTGATATTAGCGGTTCCTAGGCTTGGCATGACAATTTAGTAAGATACCCTCAGAGAAATTAATA
AAGACATACTATAACTGATT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPSLITKNNLQKLIQKKSQNRILNKLFSIDIIAPVILGIIVLLTWEISVEKMNIPPYLLPGPILVIKTMIQEWNALFMSL
ITTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAVILQTTPIVAISPLIIIWLRDNTFGALILCAWIVAFFPIIS
NTTLGLNSVDKNLSDMFKLYGASPWQTLIYLRFPSALPYFLGGLRISGGLALIGAVVAEFVAGTGGTRSGIAYQILMSSY
NLQIPRMFAALFLTTGLGIAIFVFFTVLSDYLLKDWHESAVKKDS

Sequences:

>Translated_285_residues
MPSLITKNNLQKLIQKKSQNRILNKLFSIDIIAPVILGIIVLLTWEISVEKMNIPPYLLPGPILVIKTMIQEWNALFMSL
ITTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAVILQTTPIVAISPLIIIWLRDNTFGALILCAWIVAFFPIIS
NTTLGLNSVDKNLSDMFKLYGASPWQTLIYLRFPSALPYFLGGLRISGGLALIGAVVAEFVAGTGGTRSGIAYQILMSSY
NLQIPRMFAALFLTTGLGIAIFVFFTVLSDYLLKDWHESAVKKDS
>Mature_284_residues
PSLITKNNLQKLIQKKSQNRILNKLFSIDIIAPVILGIIVLLTWEISVEKMNIPPYLLPGPILVIKTMIQEWNALFMSLI
TTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAVILQTTPIVAISPLIIIWLRDNTFGALILCAWIVAFFPIISN
TTLGLNSVDKNLSDMFKLYGASPWQTLIYLRFPSALPYFLGGLRISGGLALIGAVVAEFVAGTGGTRSGIAYQILMSSYN
LQIPRMFAALFLTTGLGIAIFVFFTVLSDYLLKDWHESAVKKDS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=147, Percent_Identity=31.2925170068027, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31437; Mature: 31306

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLITKNNLQKLIQKKSQNRILNKLFSIDIIAPVILGIIVLLTWEISVEKMNIPPYLLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC
GPILVIKTMIQEWNALFMSLITTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEE
ILQTTPIVAISPLIIIWLRDNTFGALILCAWIVAFFPIISNTTLGLNSVDKNLSDMFKLY
EHCCCCHHEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GASPWQTLIYLRFPSALPYFLGGLRISGGLALIGAVVAEFVAGTGGTRSGIAYQILMSSY
CCCHHHEEEEEECCCHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
NLQIPRMFAALFLTTGLGIAIFVFFTVLSDYLLKDWHESAVKKDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSLITKNNLQKLIQKKSQNRILNKLFSIDIIAPVILGIIVLLTWEISVEKMNIPPYLLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC
GPILVIKTMIQEWNALFMSLITTIKITVVALVVAVSSGVLISILFAQNKLIERSLFPYAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEE
ILQTTPIVAISPLIIIWLRDNTFGALILCAWIVAFFPIISNTTLGLNSVDKNLSDMFKLY
EHCCCCHHEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GASPWQTLIYLRFPSALPYFLGGLRISGGLALIGAVVAEFVAGTGGTRSGIAYQILMSSY
CCCHHHEEEEEECCCHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
NLQIPRMFAALFLTTGLGIAIFVFFTVLSDYLLKDWHESAVKKDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]