Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475309

Identifier: 113475309

GI number: 113475309

Start: 2472625

End: 2472906

Strand: Direct

Name: 113475309

Synonym: Tery_1618

Alternate gene names: NA

Gene position: 2472625-2472906 (Clockwise)

Preceding gene: 113475308

Following gene: 113475310

Centisome position: 31.9

GC content: 35.82

Gene sequence:

>282_bases
ATGATTGACATTTTAAGTTATGGTTTAATAGTTGTGGGAGTGTTCTTCTGGTTTTGGGGAACATTTCCTCTAGTTGGTCA
CAGATCGGTTTTATATAAGCTCCATAGTTTGTCGGTGGCTGATACCCTGGGTTCAATAAGTATTGTTGTGGGTTTACTCC
TGAAAATACCTAGAGAATGGCCTTTATTGCTATTAGCAATTATTACTTTGGCGATTTGGAATACACTTTTAGGATACATT
TTGGCATATTGTTCTAGTGTTGATACCGATATTGAAAGTTAA

Upstream 100 bases:

>100_bases
GCAATGATTGGTCTATTGGGGTAGTTGCAGTAATTATTTTGGCTGTAGGTAATGCGGCATTAATGCTACTAGCACATTTA
ATTAAAAGTTTAAACAAGGT

Downstream 100 bases:

>100_bases
AAGATAGATGTCTATTATTCTGTTCGGTTGAATGCTTATAATTAAGCTTGTAGTTTTGTTGTAGCTTCTCAAATATTTAT
AGCCGGGCTAAAGCCTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MIDILSYGLIVVGVFFWFWGTFPLVGHRSVLYKLHSLSVADTLGSISIVVGLLLKIPREWPLLLLAIITLAIWNTLLGYI
LAYCSSVDTDIES

Sequences:

>Translated_93_residues
MIDILSYGLIVVGVFFWFWGTFPLVGHRSVLYKLHSLSVADTLGSISIVVGLLLKIPREWPLLLLAIITLAIWNTLLGYI
LAYCSSVDTDIES
>Mature_93_residues
MIDILSYGLIVVGVFFWFWGTFPLVGHRSVLYKLHSLSVADTLGSISIVVGLLLKIPREWPLLLLAIITLAIWNTLLGYI
LAYCSSVDTDIES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10353; Mature: 10353

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDILSYGLIVVGVFFWFWGTFPLVGHRSVLYKLHSLSVADTLGSISIVVGLLLKIPREW
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLLLLAIITLAIWNTLLGYILAYCSSVDTDIES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDILSYGLIVVGVFFWFWGTFPLVGHRSVLYKLHSLSVADTLGSISIVVGLLLKIPREW
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLLLLAIITLAIWNTLLGYILAYCSSVDTDIES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA