Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475308

Identifier: 113475308

GI number: 113475308

Start: 2472377

End: 2472628

Strand: Direct

Name: 113475308

Synonym: Tery_1617

Alternate gene names: NA

Gene position: 2472377-2472628 (Clockwise)

Preceding gene: 113475307

Following gene: 113475309

Centisome position: 31.9

GC content: 34.52

Gene sequence:

>252_bases
ATGAAGTATATTTTAATTGTTATGAGTTTGTCTGTGCTCATACCCATTTATGAAGCCTGGCAGGATGACGATATTTGGCA
GAAAATGCTGGCTTTTAGTAGTATTGCTACTAAAACCTCTATTATGATATTAGTTGTGTCGGTTTTACGCAATGATTGGT
CTATTGGGGTAGTTGCAGTAATTATTTTGGCTGTAGGTAATGCGGCATTAATGCTACTAGCACATTTAATTAAAAGTTTA
AACAAGGTATGA

Upstream 100 bases:

>100_bases
TAGATATATTTTTGATTACCTTTACTCCCAAAACTATTGTCTTTAAATATAACGAAGGGGGGTGGTATGAAGTACACCGA
GTGAAACCGAAGAGAAAAAA

Downstream 100 bases:

>100_bases
TTGACATTTTAAGTTATGGTTTAATAGTTGTGGGAGTGTTCTTCTGGTTTTGGGGAACATTTCCTCTAGTTGGTCACAGA
TCGGTTTTATATAAGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAVIILAVGNAALMLLAHLIKSL
NKV

Sequences:

>Translated_83_residues
MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAVIILAVGNAALMLLAHLIKSL
NKV
>Mature_83_residues
MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAVIILAVGNAALMLLAHLIKSL
NKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9214; Mature: 9214

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IILAVGNAALMLLAHLIKSLNKV
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYILIVMSLSVLIPIYEAWQDDDIWQKMLAFSSIATKTSIMILVVSVLRNDWSIGVVAV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IILAVGNAALMLLAHLIKSLNKV
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA