| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475267
Identifier: 113475267
GI number: 113475267
Start: 2409951
End: 2410151
Strand: Reverse
Name: 113475267
Synonym: Tery_1575
Alternate gene names: NA
Gene position: 2410151-2409951 (Counterclockwise)
Preceding gene: 113475268
Following gene: 113475266
Centisome position: 31.1
GC content: 31.34
Gene sequence:
>201_bases TTGAATTCAGAAATTAAAAAGTATCCATCTTGTTCTTTACATCAAGATGTTAGTGAATATGTGGCTGATTTACAATTTCA CATGACTTTACATGCTCGTAATTTAGTTCCTTCTCTTAATCAAATAAAAGATGGTCGTGAGCAAATGTTGCAACAAACTC AAGCTCATTTTGAAAAGTTGATTTCTAGACAGCCTCTTTAA
Upstream 100 bases:
>100_bases ATATTAAGCTTCATTGCTAAACTTCAACAGAGGAAGAATTTCTATGGTACTTTTTGTGATCATAAACAAACTCAAATAAT TTAGGGGGGGGGATAAAACT
Downstream 100 bases:
>100_bases TTATTTTTATACTTATTGATTTTTCTGTAAAAACCCAGTTTTGACTAAATTAATTGGGTTTTTTAGTTTGTTTGAACAGT TCAACAACTTTACATTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKLISRQPL
Sequences:
>Translated_66_residues MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKLISRQPL >Mature_66_residues MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKLISRQPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7723; Mature: 7723
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ISRQPL HHCCCC >Mature Secondary Structure MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ISRQPL HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA