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The map label for this gene is ndhE [H]

Identifier: 113475268

GI number: 113475268

Start: 2411299

End: 2411625

Strand: Reverse

Name: ndhE [H]

Synonym: Tery_1576

Alternate gene names: 113475268

Gene position: 2411625-2411299 (Counterclockwise)

Preceding gene: 113475269

Following gene: 113475267

Centisome position: 31.12

GC content: 34.56

Gene sequence:

>327_bases
ATGGTTGATAAGTTTATGCAATTACAACTGGAATATTTTTTGTTGTTGGCAGCAGCACTTTTTTGTATAGGAATTTATGG
CTTAGTTACCAGTCGTAATGCAGTTAGGGTGCTAATGTCTATTGAGTTACTTCTCAATGCTGTTAATTTGAATTTGATGG
GTTTTTCTAATTTTCTAGATTCTCAAAATATTAAAGGTCAGGTTTTTACTGTCTTTGTCATGACGGTTGCTGCTGCTGAA
GCTGCTGTGGGTTTGGCTATAGTTTTAGCAATTTATCGTAACCGTGATACGGTGGATATGGAAGAATTTAACTTATTAAA
GTGGTAA

Upstream 100 bases:

>100_bases
CCTGTTTTAAGTTTGCCAGAACGTCCTCGTGAATTAGTTTCAAGTCTTGGTGAAAGTTCTGCTCAAATCAAATAGGGTTA
AAATAATTTGTTAAATTGAA

Downstream 100 bases:

>100_bases
TCATAGCACTGGGAAATGTTTGTGTTTGAAGAGTTTTTAACATTTCCCAATTCCTTTTGATATAGTTATTTTACTGTTTG
AATAATTTTTTTTTCCGATA

Product: NADH dehydrogenase subunit K

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase subunit 4L; NADH-plastoquinone oxidoreductase subunit 4L; NDH-1, subunit 4L; NDH-E [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MVDKFMQLQLEYFLLLAAALFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLMGFSNFLDSQNIKGQVFTVFVMTVAAAE
AAVGLAIVLAIYRNRDTVDMEEFNLLKW

Sequences:

>Translated_108_residues
MVDKFMQLQLEYFLLLAAALFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLMGFSNFLDSQNIKGQVFTVFVMTVAAAE
AAVGLAIVLAIYRNRDTVDMEEFNLLKW
>Mature_108_residues
MVDKFMQLQLEYFLLLAAALFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLMGFSNFLDSQNIKGQVFTVFVMTVAAAE
AAVGLAIVLAIYRNRDTVDMEEFNLLKW

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family [H]

Homologues:

Organism=Escherichia coli, GI1788615, Length=100, Percent_Identity=32, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 12099; Mature: 12099

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKFMQLQLEYFLLLAAALFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLMGFSNFLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEHHHHHC
SQNIKGQVFTVFVMTVAAAEAAVGLAIVLAIYRNRDTVDMEEFNLLKW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MVDKFMQLQLEYFLLLAAALFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLMGFSNFLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEHHHHHC
SQNIKGQVFTVFVMTVAAAEAAVGLAIVLAIYRNRDTVDMEEFNLLKW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA