| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475259
Identifier: 113475259
GI number: 113475259
Start: 2392917
End: 2393282
Strand: Reverse
Name: 113475259
Synonym: Tery_1567
Alternate gene names: NA
Gene position: 2393282-2392917 (Counterclockwise)
Preceding gene: 113475261
Following gene: 113475258
Centisome position: 30.88
GC content: 35.52
Gene sequence:
>366_bases ATGACCCTAGCCACAGAGAAAAAGAACCTATCTAGTGATAAATCTTTGAATGCGATAAAAAATTTCGCGGAAAGATATGC AAAAAAAACAAATACTTATTTTTGTATAGATCCTTCCGTTACTGCTGTAGTAATTGAGGGATTAGCTAAACATAAAGAAG ATTTGGGCGCTCCCTTGTGCCCATGTCGTCATTATGAAGATAAACAAGCAGAAGTCAAAGCTACTTATTGGAATTGTCCT TGTGTACCAATGCGGGAGCGTAAAGAATGTCATTGTATGTTGTTTTTAACGCCAGATAATGATTTTGCTGGTGAACAACA AGAAATTACTCAAGAAGATCTAGAGTCAACTAGAAAAAATATGTAG
Upstream 100 bases:
>100_bases GTAGATAATATGAGAAACTTGTAATTTAATTGACTTTAAAAATAGCATTATGTAGTAAAATTAACAGAACGAACAAAGAT CACCATAACAAACAAATATT
Downstream 100 bases:
>100_bases GTTGAAATTTTGAAGGAAGAAAGAAGAAAGTTAATCAACTTAGAAGCTATAGCTTAGAAGCTACAAGTCAAAATTTATTT TGATCAAGGGGATTTTGGGC
Product: ferredoxin thioredoxin reductase subunit beta
Products: NA
Alternate protein names: Ferredoxin Thioredoxin Reductase Beta Chain; Ferredoxin Thioredoxin Reductase Catalytic Beta Chain; Ferredoxin-Thioredoxin Reductase Catalytic Subunit; Ferredoxin-Thioredoxin Reductase Catalytic Beta Subunit; Ferredoxin Thioredoxin Reductase Subunit Beta; Ferredoxin-Thioredoxin Reductase Catalytic Beta Chain; Ferredoxin Thioredoxin Reductase Catalytic Chain
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLCPCRHYEDKQAEVKATYWNCP CVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKNM
Sequences:
>Translated_121_residues MTLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLCPCRHYEDKQAEVKATYWNCP CVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKNM >Mature_120_residues TLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLCPCRHYEDKQAEVKATYWNCPC VPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKNM
Specific function: Unknown
COG id: COG4802
COG function: function code C; Ferredoxin-thioredoxin reductase, catalytic subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13866; Mature: 13735
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCC PCRHYEDKQAEVKATYWNCPCVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKN CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC M C >Mature Secondary Structure TLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLC CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCC PCRHYEDKQAEVKATYWNCPCVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKN CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC M C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA