Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475258

Identifier: 113475258

GI number: 113475258

Start: 2391936

End: 2392385

Strand: Reverse

Name: 113475258

Synonym: Tery_1566

Alternate gene names: NA

Gene position: 2392385-2391936 (Counterclockwise)

Preceding gene: 113475259

Following gene: 113475255

Centisome position: 30.87

GC content: 30.89

Gene sequence:

>450_bases
TTGATATGGAATGAAATTCAATTTTTAGTATTAATTGTTGATTTAGTAATCATGACTTCTAAACAAGAAAAAATTCCCCA
AGAATTTTGGCAGGGAATAGGAGAGTTTAATAAACAAGAATTTTATAAATGCCATGATATTCTTGAGGCTTTATGGCTGG
AAGCTGGAGAGCCTGAACGAACTTTTTATCAAGGTATTTTACAAATAGCAGTAGGACTTTATCATGCAGGAAATGAAAAT
TGGCGTGGTAGTATGATGTTATTAGGAGAAGGTATTAGTAAATTACATTATTATCAGCCTAGTTATTTTGGGATTAATGT
GGATAAATTATTGATAGAAAGTTGTGAATTATTAAAATATTTGCAACAGTCTGGGCAGGAAAATTTGGCTGATTTTGTGC
GATCGCACAAAAATAGTAAGTACCCCAAAATATTAGAGCTAAAAGATTAA

Upstream 100 bases:

>100_bases
CTGCTATGAGTAAATATGGAAAACTTTTGATAAATGGTATAACTCTTATAGAAAAAAAGTCTGTGCTAAAAAGGTTGGGA
AAAAATGATAAAGTTGATAA

Downstream 100 bases:

>100_bases
TTATCTGCTAAATTACAGTAGTTTTAATGTCGGTAAACCACAATAGGGAGGTTGCATTTAGGGAGGTTGCATGTGAGGAC
ATTCCGTGCAACTTCCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MIWNEIQFLVLIVDLVIMTSKQEKIPQEFWQGIGEFNKQEFYKCHDILEALWLEAGEPERTFYQGILQIAVGLYHAGNEN
WRGSMMLLGEGISKLHYYQPSYFGINVDKLLIESCELLKYLQQSGQENLADFVRSHKNSKYPKILELKD

Sequences:

>Translated_149_residues
MIWNEIQFLVLIVDLVIMTSKQEKIPQEFWQGIGEFNKQEFYKCHDILEALWLEAGEPERTFYQGILQIAVGLYHAGNEN
WRGSMMLLGEGISKLHYYQPSYFGINVDKLLIESCELLKYLQQSGQENLADFVRSHKNSKYPKILELKD
>Mature_149_residues
MIWNEIQFLVLIVDLVIMTSKQEKIPQEFWQGIGEFNKQEFYKCHDILEALWLEAGEPERTFYQGILQIAVGLYHAGNEN
WRGSMMLLGEGISKLHYYQPSYFGINVDKLLIESCELLKYLQQSGQENLADFVRSHKNSKYPKILELKD

Specific function: Unknown

COG id: COG1547

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWNEIQFLVLIVDLVIMTSKQEKIPQEFWQGIGEFNKQEFYKCHDILEALWLEAGEPER
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH
TFYQGILQIAVGLYHAGNENWRGSMMLLGEGISKLHYYQPSYFGINVDKLLIESCELLKY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LQQSGQENLADFVRSHKNSKYPKILELKD
HHHCCHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure
MIWNEIQFLVLIVDLVIMTSKQEKIPQEFWQGIGEFNKQEFYKCHDILEALWLEAGEPER
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH
TFYQGILQIAVGLYHAGNENWRGSMMLLGEGISKLHYYQPSYFGINVDKLLIESCELLKY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LQQSGQENLADFVRSHKNSKYPKILELKD
HHHCCHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA