Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475261

Identifier: 113475261

GI number: 113475261

Start: 2397804

End: 2398958

Strand: Reverse

Name: 113475261

Synonym: Tery_1569

Alternate gene names: NA

Gene position: 2398958-2397804 (Counterclockwise)

Preceding gene: 113475262

Following gene: 113475259

Centisome position: 30.95

GC content: 42.77

Gene sequence:

>1155_bases
ATGAAAATTTACGACAAAATATCTGACTGGTTAGAAATTAATTGGGTTAAACCCGCCTATGGGGGTGGGTTACTCGGAGT
ATTGTCAATTTTCTTCTTTGCTGCTGCTGCTAATACTATGGCAGGATGGTTATACTTAATTAGTGCCATTACTTTCGCAC
TGTTGGGAGTAAGTGCTCTTTTGCCTGGGCGATCGCTACGTGAAATAAAAGTACGTCGTGATCGAATTCAACCTATAACT
GTGGGTGATAGTTTAGCGATCGCTTTAACAATAGAAAATACTACTAACAAACCACTGGCTTTGCTACAAGTCCAAGATGA
AATTCCTTTTGTATTAGGGAAACCAGTGCAACAAGCAATAGAGGTTATTCCCCCTAAAGAAAGTTACCATTGGGTTTACT
ACCTTCCTACTAAAAAAAGGGGTATATATAGATGGCATTATCTTCAGCTTAGAACTGCAGCACCTCTAGGTCTCTTCTGG
TGTCGGCGTAGTCGAAATGCTAAAGCTACTGCTATTGTCTATCCCACGGTTTTACCTTTGAGTCGTTGCCCGATCTTGGA
TGAGCTTGGTGAAGAATATAGTCGCCAACTTCATGAACATAGTCGTTTTGAAATGGCTTCCCAGGGACTAACTCGGACAT
TAAGACCGTATCGGTTTGGAGACTCTAGTCGTTTGATCCACTGGCGGAGTAGTGCACGTTATGGGGAGTTGCGGGTTCGA
GAGCTAGAGGTATCTAAGGCTGGTGAAGAAGTTCTAATTTGTCTTGATAGTGCTGCTGAGTGGCAACCTGATAATTTTGA
GGCTGCGGTGACTGCTGCTGCTTCTTTATATTTTTATGCTAACCGCTCTTTGTTAAATGTTCGACTTTGGACAGCTGCTA
CTGGGTTGGTTTATGGTAATTTGGCTATGTTGCAAACTTTGGCTGGGGTTAGGTTTGGGGAAGAGGTGGTGGTGGGAAAC
CCACCGGAAAAGCCTTTGGTTTGGTTGACTCAAAATTCTCTGAGTCTGAGTTCTCTTCCTCCTGGGAGTAGATGGTTGTT
GTGGTTAGATGAGTCTGTTGGTTATGCAGCAGAAACACCAAGGATGCAATATTGTTCTGGTTTGAATATTAGTTCTGATC
AACCTTTGGAGTTTCAACTTCAGTCTAGTGTTTGA

Upstream 100 bases:

>100_bases
GAAACCGGGTTTATTGCTTTGATTATTGTTTTTGACTTTTCTTGAAATGTCTAACTATTAGGCTTCTCGGTTAGTGCTAA
TAAATAAAATAATTTACTAA

Downstream 100 bases:

>100_bases
GGGAGTCAGGAAAATTGACTTAGTTGAGAATTTACCTGATAAAGCGATATCATGAGTTAGTTGTATCAAATAATAATGTG
GTGAAATTTGTCAAACCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKIYDKISDWLEINWVKPAYGGGLLGVLSIFFFAAAANTMAGWLYLISAITFALLGVSALLPGRSLREIKVRRDRIQPIT
VGDSLAIALTIENTTNKPLALLQVQDEIPFVLGKPVQQAIEVIPPKESYHWVYYLPTKKRGIYRWHYLQLRTAAPLGLFW
CRRSRNAKATAIVYPTVLPLSRCPILDELGEEYSRQLHEHSRFEMASQGLTRTLRPYRFGDSSRLIHWRSSARYGELRVR
ELEVSKAGEEVLICLDSAAEWQPDNFEAAVTAAASLYFYANRSLLNVRLWTAATGLVYGNLAMLQTLAGVRFGEEVVVGN
PPEKPLVWLTQNSLSLSSLPPGSRWLLWLDESVGYAAETPRMQYCSGLNISSDQPLEFQLQSSV

Sequences:

>Translated_384_residues
MKIYDKISDWLEINWVKPAYGGGLLGVLSIFFFAAAANTMAGWLYLISAITFALLGVSALLPGRSLREIKVRRDRIQPIT
VGDSLAIALTIENTTNKPLALLQVQDEIPFVLGKPVQQAIEVIPPKESYHWVYYLPTKKRGIYRWHYLQLRTAAPLGLFW
CRRSRNAKATAIVYPTVLPLSRCPILDELGEEYSRQLHEHSRFEMASQGLTRTLRPYRFGDSSRLIHWRSSARYGELRVR
ELEVSKAGEEVLICLDSAAEWQPDNFEAAVTAAASLYFYANRSLLNVRLWTAATGLVYGNLAMLQTLAGVRFGEEVVVGN
PPEKPLVWLTQNSLSLSSLPPGSRWLLWLDESVGYAAETPRMQYCSGLNISSDQPLEFQLQSSV
>Mature_384_residues
MKIYDKISDWLEINWVKPAYGGGLLGVLSIFFFAAAANTMAGWLYLISAITFALLGVSALLPGRSLREIKVRRDRIQPIT
VGDSLAIALTIENTTNKPLALLQVQDEIPFVLGKPVQQAIEVIPPKESYHWVYYLPTKKRGIYRWHYLQLRTAAPLGLFW
CRRSRNAKATAIVYPTVLPLSRCPILDELGEEYSRQLHEHSRFEMASQGLTRTLRPYRFGDSSRLIHWRSSARYGELRVR
ELEVSKAGEEVLICLDSAAEWQPDNFEAAVTAAASLYFYANRSLLNVRLWTAATGLVYGNLAMLQTLAGVRFGEEVVVGN
PPEKPLVWLTQNSLSLSSLPPGSRWLLWLDESVGYAAETPRMQYCSGLNISSDQPLEFQLQSSV

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43210; Mature: 43210

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYDKISDWLEINWVKPAYGGGLLGVLSIFFFAAAANTMAGWLYLISAITFALLGVSAL
CCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPGRSLREIKVRRDRIQPITVGDSLAIALTIENTTNKPLALLQVQDEIPFVLGKPVQQAI
CCCCCHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCEEEEEECCCCCEEECCCHHHHH
EVIPPKESYHWVYYLPTKKRGIYRWHYLQLRTAAPLGLFWCRRSRNAKATAIVYPTVLPL
HHCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCCC
SRCPILDELGEEYSRQLHEHSRFEMASQGLTRTLRPYRFGDSSRLIHWRSSARYGELRVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCEEEE
ELEVSKAGEEVLICLDSAAEWQPDNFEAAVTAAASLYFYANRSLLNVRLWTAATGLVYGN
EEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHEEEEEEECCCEEEEEEEEEECHHHHHH
LAMLQTLAGVRFGEEVVVGNPPEKPLVWLTQNSLSLSSLPPGSRWLLWLDESVGYAAETP
HHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCEECCCCCCCEEEEEEECCCCCCCCCC
RMQYCSGLNISSDQPLEFQLQSSV
CHHHHCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MKIYDKISDWLEINWVKPAYGGGLLGVLSIFFFAAAANTMAGWLYLISAITFALLGVSAL
CCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPGRSLREIKVRRDRIQPITVGDSLAIALTIENTTNKPLALLQVQDEIPFVLGKPVQQAI
CCCCCHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCEEEEEECCCCCEEECCCHHHHH
EVIPPKESYHWVYYLPTKKRGIYRWHYLQLRTAAPLGLFWCRRSRNAKATAIVYPTVLPL
HHCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCCC
SRCPILDELGEEYSRQLHEHSRFEMASQGLTRTLRPYRFGDSSRLIHWRSSARYGELRVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCEEEE
ELEVSKAGEEVLICLDSAAEWQPDNFEAAVTAAASLYFYANRSLLNVRLWTAATGLVYGN
EEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHEEEEEEECCCEEEEEEEEEECHHHHHH
LAMLQTLAGVRFGEEVVVGNPPEKPLVWLTQNSLSLSSLPPGSRWLLWLDESVGYAAETP
HHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCEECCCCCCCEEEEEEECCCCCCCCCC
RMQYCSGLNISSDQPLEFQLQSSV
CHHHHCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA